RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 IZUMO3Q5VZ72 239 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 POTEHQ6S545 545 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 MICALL1Q8N3F8 863 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 RIN3Q8TB24 985 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 DEPDC1BQ8WUY9 529 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 HMCESQ96FZ2 354 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 ASB16Q96NS5 453 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 VAT1Q99536 393 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 MAGEH1Q9H213 219 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 GRHL1Q9NZI5 618 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 CDH7Q9ULB5 785 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 TBC1D30Q9Y2I9 924 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 A0A0A0MRY4 1105 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 H0Y626 953 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 MAFKO60675 156 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 LUC7L3O95232 432 aaKnown RBP23.11■■□□□ 1.29
IRF3-228ENST00000601291 IVDP26440 423 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 ETFBP38117 255 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 MTHFRP42898 656 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 GNA12Q03113 381 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 CAV1Q03135 178 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 DLX2Q07687 328 aaPredicted RBP23.11■■□□□ 1.29
IRF3-228ENST00000601291 COL19A1Q14993 1142 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 FAM78AQ5JUQ0 283 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 ARHGEF18Q6ZSZ5 1173 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 PCGF5Q86SE9 256 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 ANKRD7Q92527 254 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 SPATA13Q96N96 652 aa23.11■■□□□ 1.29
IRF3-228ENST00000601291 IPO11Q9UI26 975 aaKnown RBP23.11■■□□□ 1.29
IRF3-228ENST00000601291 ILVBLA1L0T0 632 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 KCNK1O00180 336 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 DNALI1O14645 258 aaPredicted RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 OPHN1O60890 802 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 MYBL2P10244 700 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 CLCN6P51797 869 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 NRLP54845 237 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 CDH18Q13634 790 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ANO4Q32M45 955 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ZNF783Q6ZMS7 281 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ARHGAP36Q6ZRI8 547 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 TPGS1Q6ZTW0 290 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 GSPT2Q8IYD1 628 aaKnown RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 CCDC110Q8TBZ0 833 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 FAM161BQ96MY7 647 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 SP110Q9HB58 689 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 OBP2AQ9NY56 170 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 TPX2Q9ULW0 747 aaKnown RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 CDH23Q9H251 3354 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 MATN3O15232 486 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 PLTPP55058 493 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 WASHC5Q12768 1159 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 SERINC3Q13530 473 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ANKRD20A2Q5SQ80 823 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ANKRD20A1Q5TYW2 823 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 ANKRD20A3Q5VUR7 823 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 FBXO38Q6PIJ6 1188 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 MFN1Q8IWA4 741 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 NSMCE1Q8WV22 266 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 HNRNPLLQ8WVV9 542 aaKnown RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 ARHGEF2Q92974 986 aaKnown RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 ART4Q93070 314 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 TRPV4Q9HBA0 871 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 KLHL8Q9P2G9 620 aaPredicted RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 MTRF1LQ9UGC7 380 aaKnown RBP23.1■■□□□ 1.29
IRF3-228ENST00000601291 ANAPC5Q9UJX4 755 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 TRHDEQ9UKU6 1024 aa23.1■■□□□ 1.29
IRF3-228ENST00000601291 PTPN3P26045 913 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 ECHS1P30084 290 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 ITGA8P53708 1063 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 BASP1P80723 227 aaKnown RBP23.09■■□□□ 1.29
IRF3-228ENST00000601291 BPIFB1Q8TDL5 484 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 FATE1Q969F0 183 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 LRCH3Q96II8 777 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 MSLNLQ96KJ4 702 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 MUC3BQ9H195 1237 aa23.09■■□□□ 1.29
IRF3-228ENST00000601291 NEBLO76041 1014 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 CCNB1P14635 433 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 HOXD9P28356 352 aaPredicted RBP23.08■■□□□ 1.29
IRF3-228ENST00000601291 LTBRP36941 435 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 VIPR2P41587 438 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 IFI35P80217 286 aaPredicted RBP23.08■■□□□ 1.29
IRF3-228ENST00000601291 IL10RBQ08334 325 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 IL31Q6EBC2 164 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 CXorf57Q6NSI4 855 aaKnown RBP23.08■■□□□ 1.29
IRF3-228ENST00000601291 EMBQ6PCB8 327 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 ZDHHC24Q6UX98 284 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 ZNF567Q8N184 647 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 FBXO25Q8TCJ0 367 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 BHMTQ93088 406 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 E2F7Q96AV8 911 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 NECTIN4Q96NY8 510 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 FMO2Q99518 471 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 RAB6BQ9NRW1 208 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 ZDHHC18Q9NUE0 388 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 WNT6Q9Y6F9 365 aa23.08■■□□□ 1.29
IRF3-228ENST00000601291 SMAPO00193 183 aa23.07■■□□□ 1.28
IRF3-228ENST00000601291 GBP2P32456 591 aaPredicted RBP23.07■■□□□ 1.28
IRF3-228ENST00000601291 ACVRL1P37023 503 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms