RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 DPH5Q9H2P9 285 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 C8orf33Q9H7E9 229 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 DDIT4Q9NX09 232 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 GTSE1Q9NYZ3 720 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 CWC15Q9P013 229 aaKnown RBP11.86□□□□□ -0.51
ZNF548-211ENST00000600927 GMIPQ9P107 970 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 SIT1Q9Y3P8 196 aa11.86□□□□□ -0.51
ZNF548-211ENST00000600927 MYO16Q9Y6X6 1858 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 OTOL1A6NHN0 477 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 MAN2B1O00754 1011 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 COCHO43405 550 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 OPA1O60313 960 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 FAM153BP0C7A2 387 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 HDCP19113 662 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 CD72P21854 359 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 CTHP32929 405 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 ACTN2P35609 894 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 MAGEA9P43362 315 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 PLTPP55058 493 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TNK2Q07912 1038 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 NME3Q13232 169 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 MORF4L2Q15014 288 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 LLGL1Q15334 1064 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TRADDQ15628 312 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 P3H1Q32P28 736 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 FAM153CQ494X1 144 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 KLHDC10Q6PID8 442 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TRMT10CQ7L0Y3 403 aaKnown RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TMC3Q7Z5M5 1100 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 LRRC49Q8IUZ0 686 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 CDKL3Q8IVW4 592 aaPredicted RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 LZTR1Q8N653 840 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 DTWD2Q8NBA8 298 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 SH3RF2Q8TEC5 729 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 NELL2Q99435 816 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 FAM204AQ9H8W3 233 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 THG1LQ9NWX6 298 aaKnown RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 PAK5Q9P286 719 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 FAM153AQ9UHL3 310 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 ANAPC5Q9UJX4 755 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TPX2Q9ULW0 747 aaKnown RBP11.85□□□□□ -0.51
ZNF548-211ENST00000600927 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 USP34Q70CQ2 3546 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 MIA3Q5JRA6 1907 aa11.85□□□□□ -0.51
ZNF548-211ENST00000600927 FAM170BA6NMN3 283 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SPECC1L-ADORA2AF8WAN1 911 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SGK1O00141 431 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 LEFTY2O00292 366 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 EEF2KO00418 725 aaKnown RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 EIF3HO15372 352 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 MTSS1O43312 755 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 HOXC13P31276 330 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SERPINB6P35237 376 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SOX9P48436 509 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 ATXN1P54253 815 aaKnown RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 RING1Q06587 406 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 DPYSQ14117 519 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 UBXN2BQ14CS0 331 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 PDK1Q15118 436 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 PDGFRLQ15198 375 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 EML3Q32P44 896 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 HSP90B2PQ58FF3 399 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 HECTD3Q5T447 861 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 TRIM68Q6AZZ1 485 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 HIBCHQ6NVY1 386 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 DARS2Q6PI48 645 aaKnown RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 RFX8Q6ZV50 586 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 RALGPS2Q86X27 583 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 CSGALNACT1Q8TDX6 532 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SLC39A13Q96H72 371 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 HINFPQ9BQA5 517 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 TMEM121Q9BTD3 319 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 TKTL2Q9H0I9 626 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 NEUROG2Q9H2A3 272 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 NMUR1Q9HB89 426 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 GKN1Q9NS71 199 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 OSER1Q9NX31 292 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SLC12A6Q9UHW9 1150 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 SHOC2Q9UQ13 582 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
ZNF548-211ENST00000600927 CPQQ9Y646 472 aa11.84□□□□□ -0.51
ZNF548-211ENST00000600927 F5P12259 2224 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms