RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 INAVAQ3KP66 663 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 DHRS13Q6UX07 377 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 SLC47A2Q86VL8 602 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 OR8D1Q8WZ84 308 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 SHC3Q92529 594 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 MUC3BQ9H195 1237 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 ADAMTS1Q9UHI8 967 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 HS3ST4Q9Y661 456 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 ZFHX4Q86UP3 3567 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 PKD1L2Q7Z442 2459 aa18.1■□□□□ 0.49
SHKBP1-223ENST00000600552 A0A1B0GTQ1 180 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 PCDHGA12O60330 932 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 GLI1P08151 1106 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 C7P10643 843 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 CCR5P51681 352 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 SNX16P57768 344 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 SLC6A3Q01959 620 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 ELAVL3Q14576 367 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 DLG2Q15700 870 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 TTC39BQ5VTQ0 682 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 TAF3Q5VWG9 929 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 CXorf57Q6NSI4 855 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 TMPRSS7Q7RTY8 843 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 PRPF39Q86UA1 669 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 IRF2BP1Q8IU81 584 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 EID2Q8N6I1 236 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 OR52K2Q8NGK3 314 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 ELF4Q99607 663 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 FEM1AQ9BSK4 669 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 GDF3Q9NR23 364 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 PCDHGC3Q9UN70 934 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 RAXQ9Y2V3 346 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 ZFYVE26Q68DK2 2539 aa18.09■□□□□ 0.49
SHKBP1-223ENST00000600552 NYNRINQ9P2P1 1898 aaKnown RBP18.08■□□□□ 0.49
SHKBP1-223ENST00000600552 DFNA5O60443 496 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 CLCN1P35523 988 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 SULT1E1P49888 294 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 OXCT1P55809 520 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 CLDN6P56747 220 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 UBE2HP62256 183 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 RAPGEF1Q13905 1077 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 PTPN20Q4JDL3 420 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 SLC45A4Q5BKX6 768 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 Q6ZVU0 165 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 DSG4Q86SJ6 1040 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 HNRNPLLQ8WVV9 542 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 SPAG5Q96R06 1193 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 PPP1R9BQ96SB3 815 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 MYOCQ99972 504 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 SIX2Q9NPC8 291 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 ASNSD1Q9NWL6 643 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 SARDHQ9UL12 918 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 DOCK9Q9BZ29 2069 aa18.08■□□□□ 0.48
SHKBP1-223ENST00000600552 ASPMQ8IZT6 3477 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 DMXL2Q8TDJ6 3036 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 TRABD2BA6NFA1 517 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 TLR4O00206 839 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 DAB1O75553 588 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CNTN5O94779 1100 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 ADCY5O95622 1261 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 LDOC1O95751 146 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CAPNS1P04632 268 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 RHOCP08134 193 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 TFE3P19532 575 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 NOS2P35228 1153 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 DRD3P35462 400 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 PLK1P53350 603 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CYP4F3Q08477 520 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 BNIP3Q12983 259 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 DNAJC3Q13217 504 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 EIF4EBP2Q13542 120 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 FAM46CQ5VWP2 391 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 OLFML1Q6UWY5 402 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 GALNT15Q8N3T1 639 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 PIP4K2CQ8TBX8 421 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 FRS2Q8WU20 508 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 KLK6Q92876 244 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CNDP2Q96KP4 475 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 TKTL2Q9H0I9 626 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 WDCPQ9H6R7 721 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 CA5BQ9Y2D0 317 aa18.07■□□□□ 0.48
SHKBP1-223ENST00000600552 ANKRD11Q6UB99 2663 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 DSPP15924 2871 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 A0A1W2PR77 199 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 C1QTNF3-AMACRE9PGA6 284 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 GOLGA8SH3BPF8 625 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 ENC1O14682 589 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 SNAP91O60641 907 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 SHBQ15464 509 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 MAN2A1Q16706 1144 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 C2CD6Q53TS8 623 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 MLKLQ8NB16 471 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 ATP11CQ8NB49 1132 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 TMPRSS4Q9NRS4 437 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 PIGVQ9NUD9 493 aa18.06■□□□□ 0.48
SHKBP1-223ENST00000600552 GTPBP10A4D1E9 387 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-223ENST00000600552 CLDN11O75508 207 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms