RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 GARSP41250 739 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 CHRNA4P43681 627 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 SERPINB9P50453 376 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 EPHB1P54762 984 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 YWHAHQ04917 246 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 WLSQ5T9L3 541 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 PLD6Q8N2A8 252 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 FAM193BQ96PV7 902 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 FICDQ9BVA6 458 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 DENND2DQ9H6A0 471 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 SNX15Q9NRS6 342 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 GABRDO14764 452 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 DCLK1O15075 740 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 FBXO21O94952 628 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 VAPBO95292 243 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 HSPA4LO95757 839 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 BPGMP07738 259 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC5A3P53794 718 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 EFEMP1Q12805 493 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 KPNB1Q14974 876 aaKnown RBP11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 TSNAXIP1Q2TAA8 658 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 AP1ARQ63HQ0 302 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 NXNQ6DKJ4 435 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 ASRGL1Q7L266 308 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 KCNMB4Q86W47 210 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 ATAD1Q8NBU5 361 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 MIPEPQ99797 713 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 TASP1Q9H6P5 420 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 KCNK13Q9HB14 408 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 FETUBQ9UGM5 382 aa11.77□□□□□ -0.52
ARHGEF1-220ENST00000600274 A0A096LPK6 155 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PAGE1O75459 146 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PTPN4P29074 926 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SERPINB6P35237 376 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PGM1P36871 562 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCR10P46092 362 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TUBP50607 506 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 DPYSQ14117 519 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PRPSAP1Q14558 356 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PCBP1Q15365 356 aaKnown RBP eCLIP11.77□□□□□ -0.532e-6■■■■■ 31.1
ARHGEF1-220ENST00000600274 UPP1Q16831 310 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CIR1Q86X95 450 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 WDR75Q8IWA0 830 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCNYL1Q8N7R7 359 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 NAF1Q96HR8 494 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 FCRL2Q96LA5 508 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 ZNF570Q96NI8 536 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CADM1Q9BY67 442 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 LRMDAQ9H2I8 198 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 E9PBE3 544 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 KLHL41O60662 606 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 C1QAP02745 245 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCNB1P14635 433 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TSHRP16473 764 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 MX2P20592 715 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC1A6P48664 564 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC18A1P54219 525 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 ARHGAP8P85298 464 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 USP10Q14694 798 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TMEM154Q6P9G4 183 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 RGS9BPQ6ZS82 235 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SAPCD2Q86UD0 394 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TREML1Q86YW5 311 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 CASP10Q92851 521 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 MTBPQ96DY7 904 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TSNARE1Q96NA8 513 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 TSC22D3Q99576 134 aa11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 SSU72Q9NP77 194 aaKnown RBP11.77□□□□□ -0.53
ARHGEF1-220ENST00000600274 RBM22Q9NW64 420 aaKnown RBP eCLIP11.77□□□□□ -0.535e-7■■□□□ 12.3
ARHGEF1-220ENST00000600274 A0A1W2PQH9 124 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CCDC22O60826 627 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ATP5HO75947 161 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 GM2AP17900 193 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CD68P34810 354 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 GP5P40197 560 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 ATXN3P54252 364 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 MPP3Q13368 585 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 DENND6AQ8IWF6 608 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TRIM42Q8IWZ5 723 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TMEM86AQ8N2M4 240 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 SLC2A13Q96QE2 648 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 OMDQ99983 421 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 HCSTQ9UBK5 93 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 TLK1Q9UKI8 766 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 RALBP11234 206 aa11.76□□□□□ -0.53
ARHGEF1-220ENST00000600274 CXCR3P49682 368 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms