RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CSPG4P5Q96PW8 444 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 CIPCQ9C0C6 399 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.1□□□□□ -0.15
VRK3-219ENST00000600137 DNAI1Q9UI46 699 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 ERVW-1Q9UQF0 538 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 MFHAS1Q9Y4C4 1052 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 STON1Q9Y6Q2 735 aa14.1□□□□□ -0.15
VRK3-219ENST00000600137 GRID2IPA4D2P6 1211 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 FGF10O15520 208 aaPredicted RBP14.09□□□□□ -0.15
VRK3-219ENST00000600137 SNAP91O60641 907 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 MT-CO1P00395 513 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 RHOCP08134 193 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 AMPD1P23109 780 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 KDELR1P24390 212 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 PRKCHP24723 683 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 HOXA6P31267 233 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 CCR3P51677 355 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 ZNF135P52742 658 aaPredicted RBP14.09□□□□□ -0.15
VRK3-219ENST00000600137 CDH6P55285 790 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 OXCT1P55809 520 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 TPI1P60174 286 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 GNA12Q03113 381 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 DMWDQ09019 674 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 DPYSL3Q14195 570 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 ANGPT1Q15389 498 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 C6orf118Q5T5N4 469 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 KIAA1211LQ6NV74 962 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 TSSK4Q6SA08 328 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 KIAA1328Q86T90 577 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 TP53INP2Q8IXH6 220 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 KDM1BQ8NB78 822 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 PCDH19Q8TAB3 1148 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 ARHGEF2Q92974 986 aaKnown RBP14.09□□□□□ -0.15
VRK3-219ENST00000600137 FAF2Q96CS3 445 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 RPL10LQ96L21 214 aaKnown RBP14.09□□□□□ -0.15
VRK3-219ENST00000600137 PPP1R9BQ96SB3 815 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 EML5Q05BV3 1969 aa14.09□□□□□ -0.15
VRK3-219ENST00000600137 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.15
VRK3-219ENST00000600137 NPC1O15118 1278 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 LAMTOR5O43504 91 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 ASLP04424 464 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 SRPRAP08240 638 aaKnown RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 KRT7P08729 469 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 MARCKSL1P49006 195 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 STK19P49842 368 aaPredicted RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 ECT2LQ008S8 904 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 KIF5AQ12840 1032 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 TAZQ16635 292 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 CCDC117Q8IWD4 279 aaPredicted RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 CHPFQ8IZ52 775 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 NPWQ8N729 165 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 PQLC3Q8N755 202 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 NETO2Q8NC67 525 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 FRS2Q8WU20 508 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 UCMAQ8WVF2 138 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 KRT35Q92764 455 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 ACDQ96AP0 544 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 CALR3Q96L12 384 aaKnown RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 SLC39A8Q9C0K1 460 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 MAGEH1Q9H213 219 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 MTG2Q9H4K7 406 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 CATSPERBQ9H7T0 1116 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 KLHL11Q9NVR0 708 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 RCOR3Q9P2K3 495 aaPredicted RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 VPS51Q9UID3 782 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 ACTL7AQ9Y615 435 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 RAD54BQ9Y620 910 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.16
VRK3-219ENST00000600137 VPS13AQ96RL7 3174 aa14.08□□□□□ -0.16
VRK3-219ENST00000600137 RASA4BC9J798 803 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 RASA4O43374 803 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 ZNF821O75541 412 aaPredicted RBP14.07□□□□□ -0.16
VRK3-219ENST00000600137 MOCS3O95396 460 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 SP9P0CG40 484 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 HLA-EP13747 358 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 PEX5P50542 639 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 YBEYP58557 167 aaPredicted RBP14.07□□□□□ -0.16
VRK3-219ENST00000600137 ARF5P84085 180 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 SULT2A1Q06520 285 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 PDK2Q15119 407 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 EOGTQ5NDL2 527 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 TRMT11Q7Z4G4 463 aaKnown RBP14.07□□□□□ -0.16
VRK3-219ENST00000600137 NT5DC3Q86UY8 548 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 RASSF3Q86WH2 238 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 RHOT1Q8IXI2 618 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 RNF10Q8N5U6 811 aaKnown RBP14.07□□□□□ -0.16
VRK3-219ENST00000600137 ZNF366Q8N895 744 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 DCAF4L2Q8NA75 395 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 VOPP1Q96AW1 172 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 MUC3BQ9H195 1237 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 VPS28Q9UK41 221 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 PLA2G4CQ9UP65 541 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 HS3ST2Q9Y278 367 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
VRK3-219ENST00000600137 WDR87Q6ZQQ6 2873 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms