RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MAGEB5Q9BZ81 275 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 AMFRQ9UKV5 643 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 INTS6Q9UL03 887 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 MMP17Q9ULZ9 603 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 HPCAL4Q9UM19 191 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 GUCA1BQ9UMX6 200 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 SLC8A2Q9UPR5 921 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 PCDHA3Q9Y5H8 950 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 KIAA1549LQ6ZVL6 1849 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ZRANB2O95218 330 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 ZFXP17010 805 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 IL4RP24394 825 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CTNNA2P26232 953 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 HOXA6P31267 233 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CETN2P41208 172 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CLCN6P51797 869 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 DGKEP52429 567 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 C2orf27AQ580R0 203 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 TMCO3Q6UWJ1 677 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 RCOR2Q8IZ40 523 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CHPFQ8IZ52 775 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CAMKK1Q8N5S9 505 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 UBL4BQ8N7F7 174 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 RPLP0P6Q8NHW5 317 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 CASKIN2Q8WXE0 1202 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 LRFN3Q9BTN0 628 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 ACE2Q9BYF1 805 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 KCNH6Q9H252 994 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 FBRSQ9HAH7 460 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 HS3ST2Q9Y278 367 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 EFR3BQ9Y2G0 817 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 ZDBF2Q9HCK1 2354 aa16.97■□□□□ 0.31
SHKBP1-219ENST00000599575 LRRD1A4D1F6 860 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 FAM86C2PA6NEL3 165 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 DCLK1O15075 740 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 PALMO75781 387 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 MSNP26038 577 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 MZF1P28698 734 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 TIE1P35590 1138 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 CXCL12P48061 93 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 RWDD2BP57060 319 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 MTAPQ13126 283 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 STARD3Q14849 445 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 ATP13A4Q4VNC1 1196 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 ANKRD20A8PQ5CZ79 823 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 AFMIDQ63HM1 303 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 Q6ZS52 159 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 NT5DC3Q86UY8 548 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 C1orf210Q8IVY1 113 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 ARHGEF2Q92974 986 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 LRRC19Q9H756 370 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 ATP13A1Q9HD20 1204 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 LZTFL1Q9NQ48 299 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 TRIM10Q9UDY6 481 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 SUN2Q9UH99 717 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 DNAI1Q9UI46 699 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 SLC25A13Q9UJS0 675 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 FBXO4Q9UKT5 387 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 RAD54BQ9Y620 910 aa16.96■□□□□ 0.31
SHKBP1-219ENST00000599575 ARHGAP42A6NI28 874 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 ZBTB24O43167 697 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 LAMTOR5O43504 91 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 KRT1P04264 644 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 GJC1P36383 396 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 SEC13P55735 322 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 TFDP2Q14188 446 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 GAS6Q14393 721 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 ZNF234Q14588 700 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 PAFAH1B3Q15102 231 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 TAZQ16635 292 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 PTPRNQ16849 979 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 TMCO4Q5TGY1 634 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 EGFLAMQ63HQ2 1017 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 IL31Q6EBC2 164 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 SERPINA13PQ6UXR4 307 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 APCDD1Q8J025 514 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 OR52K2Q8NGK3 314 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 RNF157Q96PX1 679 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 TMEM245Q9H330 911 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 POLMQ9NP87 494 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 NDFIP2Q9NV92 336 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 SPATA6Q9NWH7 488 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 ERVW-1Q9UQF0 538 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 CAPN6Q9Y6Q1 641 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 STON1Q9Y6Q2 735 aa16.95■□□□□ 0.3
SHKBP1-219ENST00000599575 A0A0D9SEW6 157 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 CCDC163A0A0D9SF12 145 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 TARSL2A2RTX5 802 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 C3orf70A6NLC5 250 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 RASA4BC9J798 803 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 RASA4O43374 803 aa16.94■□□□□ 0.3
SHKBP1-219ENST00000599575 KDELR3O43731 214 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms