RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 C21orf59P57076 290 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 RACK1P63244 317 aaKnown RBP19.29■□□□□ 0.68
PNKP-213ENST00000599543 SLC6A3Q01959 620 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 CENPCQ03188 943 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 UBXN1Q04323 297 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 RAPGEF1Q13905 1077 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 SYCP1Q15431 976 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 PTPN20Q4JDL3 420 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 FKBP15Q5T1M5 1219 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 KLHDC7AQ5VTJ3 777 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 SLC26A9Q7LBE3 791 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 STK40Q8N2I9 435 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 OR2T34Q8NGX1 318 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 RHBDD1Q8TEB9 315 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 PTPRN2Q92932 1015 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 PCMTD1Q96MG8 357 aaPredicted RBP19.29■□□□□ 0.68
PNKP-213ENST00000599543 CDC6Q99741 560 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 ACE2Q9BYF1 805 aaPredicted RBP19.29■□□□□ 0.68
PNKP-213ENST00000599543 PLCB1Q9NQ66 1216 aa19.29■□□□□ 0.68
PNKP-213ENST00000599543 FAM207AQ9NSI2 230 aaPredicted RBP19.29■□□□□ 0.68
PNKP-213ENST00000599543 A0A1W2PPC4 97 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 FAM170AA1A519 330 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 TEX33O43247 280 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 C5AR1P21730 350 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 CLCN1P35523 988 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 CCT8P50990 548 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 PLK1P53350 603 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 BPIFB4P59827 614 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 AUHQ13825 339 aaKnown RBP19.28■□□□□ 0.68
PNKP-213ENST00000599543 CXorf57Q6NSI4 855 aaKnown RBP19.28■□□□□ 0.68
PNKP-213ENST00000599543 DBX2Q6ZNG2 339 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 SND1Q7KZF4 910 aaKnown RBP eCLIP19.28■□□□□ 0.68
PNKP-213ENST00000599543 ZDHHC17Q8IUH5 632 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 AADATQ8N5Z0 425 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 BAHD1Q8TBE0 780 aaPredicted RBP19.28■□□□□ 0.68
PNKP-213ENST00000599543 SKA1Q96BD8 255 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 SLC6A18Q96N87 628 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 FAM129BQ96TA1 746 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 ORAI3Q9BRQ5 295 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 PDCL3Q9H2J4 239 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 TSPY26PQ9H489 355 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 SLC25A13Q9UJS0 675 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 VANGL2Q9ULK5 521 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 ZFYVE26Q68DK2 2539 aa19.28■□□□□ 0.68
PNKP-213ENST00000599543 DSPP15924 2871 aaKnown RBP19.28■□□□□ 0.68
PNKP-213ENST00000599543 PLXNB3Q9ULL4 1909 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 CELSR3Q9NYQ7 3312 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 GOLGA4Q13439 2230 aaKnown RBP19.27■□□□□ 0.68
PNKP-213ENST00000599543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.27■□□□□ 0.68
PNKP-213ENST00000599543 M0QYT0 321 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 GOT1P17174 413 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 NOS2P35228 1153 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 CTSKP43235 329 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 ZNF177Q13360 481 aaPredicted RBP19.27■□□□□ 0.68
PNKP-213ENST00000599543 DSG4Q86SJ6 1040 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 FAM71AQ8IYT1 594 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 ZNF397Q8NF99 534 aaPredicted RBP19.27■□□□□ 0.68
PNKP-213ENST00000599543 OR14C36Q8NHC7 312 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 NAP1L5Q96NT1 182 aaPredicted RBP19.27■□□□□ 0.68
PNKP-213ENST00000599543 SPAG5Q96R06 1193 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 GANQ9H2C0 597 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 VPS28Q9UK41 221 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 STAP1Q9ULZ2 295 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 SIK3Q9Y2K2 1263 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 HS3ST4Q9Y661 456 aa19.27■□□□□ 0.68
PNKP-213ENST00000599543 H0Y8X5 98 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 KCNK3O14649 394 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 VILLO15195 856 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 DFNA5O60443 496 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 PAGE1O75459 146 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 CLDN11O75508 207 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 VAV1P15498 845 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 GGCXP38435 758 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 GRK6P43250 576 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 ADPRHP54922 357 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 DRAP1Q14919 205 aaPredicted RBP19.26■□□□□ 0.67
PNKP-213ENST00000599543 INAVAQ3KP66 663 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 ACCSLQ4AC99 568 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 KCNT1Q5JUK3 1230 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 SLCO6A1Q86UG4 719 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 TMEM35BQ8NCS4 154 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 RNF214Q8ND24 703 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 SIK2Q9H0K1 926 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 NLRC4Q9NPP4 1024 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 AASDHPPTQ9NRN7 309 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 RRN3Q9NYV6 651 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 TPX2Q9ULW0 747 aaKnown RBP19.26■□□□□ 0.67
PNKP-213ENST00000599543 BTBD3Q9Y2F9 522 aa19.26■□□□□ 0.67
PNKP-213ENST00000599543 ACACAQ13085 2346 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 DOCK4Q8N1I0 1966 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 SRRM3A6NNA2 597 aaPredicted RBP19.25■□□□□ 0.67
PNKP-213ENST00000599543 PCDHGA12O60330 932 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 UCHL3P15374 230 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 SULT1E1P49888 294 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 IRAK1P51617 712 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 CCR5P51681 352 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 RNASE9P60153 205 aaKnown RBP19.25■□□□□ 0.67
PNKP-213ENST00000599543 POLR2FP61218 127 aaKnown RBP19.25■□□□□ 0.67
PNKP-213ENST00000599543 IL9RQ01113 521 aa19.25■□□□□ 0.67
PNKP-213ENST00000599543 FRS2Q8WU20 508 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 262.5 ms