RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SGK2Q9HBY8 427 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 RXFP3Q9NSD7 469 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 DONSONQ9NYP3 566 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 AIPL1Q9NZN9 384 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 PILRBQ9UKJ0 227 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 LRRC72A6NJI9 287 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 TMCO5BA8MYB1 307 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 TTC34A8MYJ7 566 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 KRT37O76014 449 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 ADH1BP00325 375 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 IGLV3-19P01714 112 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 SERPINF2P08697 491 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 TPM1P09493 284 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 KCNA4P22459 653 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 RFC1P35251 1148 aaPredicted RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 CTSOP43234 321 aaPredicted RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 ELAVL3Q14576 367 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 C15orf59Q2T9L4 293 aaPredicted RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 OTUD1Q5VV17 481 aaPredicted RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 CXorf57Q6NSI4 855 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 RETSATQ6NUM9 610 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 SLC23A3Q6PIS1 610 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 WDR59Q6PJI9 974 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 USP30Q70CQ3 517 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 MON1BQ7L1V2 547 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 TFAP2DQ7Z6R9 452 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 SLFN11Q7Z7L1 901 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 MCOLN2Q8IZK6 566 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 HDDC3Q8N4P3 179 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 ATP11CQ8NB49 1132 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 JOSD2Q8TAC2 188 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 SNX19Q92543 992 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 BAP1Q92560 729 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 MRGPRX3Q96LB0 322 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 MCEEQ96PE7 176 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 NCAPGQ9BPX3 1015 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 CNPY3Q9BT09 278 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIG1-218ENST00000599322 OSBPL2Q9H1P3 480 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 HAUS4Q9H6D7 363 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 MRPL47Q9HD33 250 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 FBXL12Q9NXK8 326 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 PPARGC1AQ9UBK2 798 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 SLCO3A1Q9UIG8 710 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 HPCAL4Q9UM19 191 aa14.52□□□□□ -0.09
LIG1-218ENST00000599322 LUC7L2Q9Y383 392 aaKnown RBP14.52□□□□□ -0.09
LIG1-218ENST00000599322 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIG1-218ENST00000599322 ITIH6Q6UXX5 1313 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 ATXN2Q99700 1313 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 ILVBLA1L0T0 632 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 METTL12A8MUP2 240 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 C1QTNF3-AMACRE9PGA6 284 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 RNF8O76064 485 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 SEMA4FO95754 770 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 IL1BP01584 269 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 GZMAP12544 262 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 C5AR1P21730 350 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 SLC8A1P32418 973 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 PRKCIP41743 596 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 VASPP50552 380 aaPredicted RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 ZNF143P52747 638 aaPredicted RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 AIF1P55008 147 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 IRX4P78413 519 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 SLC20A2Q08357 652 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 PTP4A2Q12974 167 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 CST6Q15828 149 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 DCAF12L1Q5VU92 463 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 TCEAL6Q6IPX3 200 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 MMAAQ8IVH4 418 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 CPLX3Q8WVH0 158 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 TCEAL3Q969E4 200 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 GTPBP2Q9BX10 602 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 PABPC3Q9H361 631 aaKnown RBP14.51□□□□□ -0.09
LIG1-218ENST00000599322 TSPY26PQ9H489 355 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 MPP6Q9NZW5 540 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 IFNKQ9P0W0 207 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 SCINQ9Y6U3 715 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 PLXND1Q9Y4D7 1925 aa14.51□□□□□ -0.09
LIG1-218ENST00000599322 IGLV3-10A0A075B6K4 115 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 A0A1B0GTW7 788 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 A0A1W2PQJ5 194 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 C4orf47A7E2U8 309 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 TM4SF5O14894 197 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 BNIP3LO60238 219 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 RTN2O75298 545 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 CNTN5O94779 1100 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 FTLP02792 175 aaPredicted RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 MYBL1P10243 752 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 RHOQP17081 205 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 RRM1P23921 792 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 MAPK8P45983 427 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 PSMD8P48556 350 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 STK19P49842 368 aaPredicted RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 CLCN6P51797 869 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 ZBED6P86452 979 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms