RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 MPP6Q9NZW5 540 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 CNOT8Q9UFF9 292 aaKnown RBP12.43□□□□□ -0.42
ZNF548-209ENST00000598895 EBF1Q9UH73 591 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
ZNF548-209ENST00000598895 MYO18AQ92614 2054 aaKnown RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 CCDC163A0A0D9SF12 145 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 A0A1B0GVM2 712 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 TCAF2A6NFQ2 919 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 E9PAM4 449 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 H3BQF6 201 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 RTN2O75298 545 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 ENDOD1O94919 500 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 PRLRP16471 622 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 NDUFV2P19404 249 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 BCKDHBP21953 392 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 CNR2P34972 360 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 LMAN1P49257 510 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 VAV2P52735 878 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 HDAC4P56524 1084 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 VSNL1P62760 191 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 OGDHQ02218 1023 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 STARD3Q14849 445 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 PTPRNQ16849 979 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 USP39Q53GS9 565 aaKnown RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 ALFQ53S48 1182 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 KIAA1324Q6UXG2 1013 aaKnown RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 TFAP2DQ7Z6R9 452 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 TRIM58Q8NG06 486 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 CHP1Q99653 195 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 KIAA1522Q9P206 1035 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 VPS18Q9P253 973 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 PLA2G4CQ9UP65 541 aa12.42□□□□□ -0.42
ZNF548-209ENST00000598895 REXO2Q9Y3B8 237 aaKnown RBP12.42□□□□□ -0.42
ZNF548-209ENST00000598895 A0A087X0T9 212 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ZBTB24O43167 697 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 TIMM44O43615 452 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 SYNCRIPO60506 623 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 MOCS3O95396 460 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ATP5BP06576 529 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 DLDP09622 509 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 FAM228BP0C875 321 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 HNRNPH3P31942 346 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ADRA1BP35368 520 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 STK19P49842 368 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF143P52747 638 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 SLC20A2Q08357 652 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF177Q13360 481 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 CCDC6Q16204 474 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 PLEKHG6Q3KR16 790 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ARL13BQ3SXY8 428 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 RNF219Q5W0B1 726 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 CXorf57Q6NSI4 855 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF683Q8IZ20 524 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 DEFB119Q8N690 84 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 VCPIP1Q96JH7 1222 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 RPL10LQ96L21 214 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 ALS2CR12Q96Q35 445 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 TRIM7Q9C029 511 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 NHEJ1Q9H9Q4 299 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 LUC7LQ9NQ29 371 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 PARVAQ9NVD7 372 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 CYP8B1Q9UNU6 501 aa12.41□□□□□ -0.42
ZNF548-209ENST00000598895 BZW2Q9Y6E2 419 aaKnown RBP12.41□□□□□ -0.42
ZNF548-209ENST00000598895 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 A0A0U1RQJ8 604 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 TTC34A8MYJ7 566 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 FAM72CH0Y354 149 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MAP3K13O43283 966 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 RHOCP08134 193 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 GZMAP12544 262 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 PSMA2P25787 234 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 EIF4A3P38919 411 aaKnown RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 CDH4P55283 916 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 ST8SIA6P61647 398 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 MTA1Q13330 715 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 ENPP2Q13822 863 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 FAM72AQ5TYM5 149 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 LAIR1Q6GTX8 287 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 FAM72DQ6L9T8 149 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 RWDD4Q6NW29 188 aaKnown RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 ZNF572Q7Z3I7 529 aaPredicted RBP12.4□□□□□ -0.42
ZNF548-209ENST00000598895 VPS36Q86VN1 386 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 FAM72BQ86X60 149 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
ZNF548-209ENST00000598895 CENPIQ92674 756 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms