RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TRIM11Q96F44 468 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 RSPH9Q9H1X1 276 aaPredicted RBP21.65■■□□□ 1.06
PNKP-209ENST00000596726 RETREG1Q9H6L5 497 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 WSB2Q9NYS7 404 aaPredicted RBP21.65■■□□□ 1.06
PNKP-209ENST00000596726 VPS28Q9UK41 221 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 CEP250Q9BV73 2442 aa21.65■■□□□ 1.06
PNKP-209ENST00000596726 NUMA1Q14980 2115 aa21.64■■□□□ 1.06
PNKP-209ENST00000596726 A0A087X0T9 212 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 EDDM13A0A1B0GTR0 161 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 ILVBLA1L0T0 632 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 FOXD2O60548 495 aaPredicted RBP21.64■■□□□ 1.05
PNKP-209ENST00000596726 LRIG2O94898 1065 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 FAM228BP0C875 321 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 CD6P30203 668 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 OR1E1P30953 314 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 PTGER3P43115 390 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 AIF1P55008 147 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 ZBTB16Q05516 673 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 ZNF252P-AS1Q0IIN9 211 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 CCDC6Q16204 474 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 C6orf118Q5T5N4 469 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 SCYL2Q6P3W7 929 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 ZNF783Q6ZMS7 281 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 VPS36Q86VN1 386 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 NLRP14Q86W24 1093 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 FRS2Q8WU20 508 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.64■■□□□ 1.05
PNKP-209ENST00000596726 TRIM7Q9C029 511 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 MUC3BQ9H195 1237 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 VPS45Q9NRW7 570 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 FZD10Q9ULW2 581 aa21.64■■□□□ 1.05
PNKP-209ENST00000596726 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.64■■□□□ 1.05
PNKP-209ENST00000596726 A0A0D9SEW6 157 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 ATP9BO43861 1147 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 ACADMP11310 421 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 OXTRP30559 389 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 L1CAMP32004 1257 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 NNMTP40261 264 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 LMNB2Q03252 620 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 CYP2U1Q7Z449 544 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 ARFGAP1Q8N6T3 406 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 TOE1Q96GM8 510 aaKnown RBP21.63■■□□□ 1.05
PNKP-209ENST00000596726 ZNF419Q96HQ0 510 aaPredicted RBP21.63■■□□□ 1.05
PNKP-209ENST00000596726 FAM129BQ96TA1 746 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 DNAJC7Q99615 494 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 SLC25A13Q9UJS0 675 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 NENFQ9UMX5 172 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 SCINQ9Y6U3 715 aa21.63■■□□□ 1.05
PNKP-209ENST00000596726 RHOQP17081 205 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 DESP17661 470 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 PSMA2P25787 234 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 KRT83P78385 493 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 SF3A2Q15428 464 aaKnown RBP21.62■■□□□ 1.05
PNKP-209ENST00000596726 EFHC2Q5JST6 749 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 PEAR1Q5VY43 1037 aaPredicted RBP21.62■■□□□ 1.05
PNKP-209ENST00000596726 ZNF776Q68DI1 518 aaPredicted RBP21.62■■□□□ 1.05
PNKP-209ENST00000596726 SARM1Q6SZW1 724 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 CACUL1Q86Y37 369 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 SLC41A1Q8IVJ1 513 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 PYROXD2Q8N2H3 581 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 SH2D3CQ8N5H7 860 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 DEFB119Q8N690 84 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 DCAF4L2Q8NA75 395 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 OR8K1Q8NGG5 319 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 TBC1D31Q96DN5 1066 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 C2orf49Q9BVC5 232 aaPredicted RBP21.62■■□□□ 1.05
PNKP-209ENST00000596726 SMOC1Q9H4F8 434 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 MRPL47Q9HD33 250 aaKnown RBP21.62■■□□□ 1.05
PNKP-209ENST00000596726 TMEM248Q9NWD8 314 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 MYO1AQ9UBC5 1043 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 VPS51Q9UID3 782 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 HS3ST2Q9Y278 367 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 DCHS1Q96JQ0 3298 aa21.62■■□□□ 1.05
PNKP-209ENST00000596726 PRR5-ARHGAP8B1AHC4 643 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 SNAP91O60641 907 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 NDUFS2O75306 463 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 VAV1P15498 845 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 MAPKAPK2P49137 400 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 ARHGAP8P85298 464 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 ZNF33AQ06730 810 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 SEMA3BQ13214 749 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 LYSMD4Q5XG99 296 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 RWDD4Q6NW29 188 aaKnown RBP21.61■■□□□ 1.05
PNKP-209ENST00000596726 ALKBH5Q6P6C2 394 aaKnown RBP21.61■■□□□ 1.05
PNKP-209ENST00000596726 ARMCX6Q7L4S7 300 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 OR7D4Q8NG98 312 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 PIGKQ92643 395 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 NDFIP2Q9NV92 336 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 PILRBQ9UKJ0 227 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 SCML1Q9UN30 329 aa21.61■■□□□ 1.05
PNKP-209ENST00000596726 ZMPSTE24O75844 475 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 MT-CO1P00395 513 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 DNTTP04053 509 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 SRCP12931 536 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 EIF4A3P38919 411 aaKnown RBP21.6■■□□□ 1.05
PNKP-209ENST00000596726 DPP6P42658 865 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 GNA12Q03113 381 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 SYT12Q8IV01 421 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 STK40Q8N2I9 435 aa21.6■■□□□ 1.05
PNKP-209ENST00000596726 CADM4Q8NFZ8 388 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms