RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 USP8P40818 1118 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ARRB1P49407 418 aaPredicted RBP16.4■□□□□ 0.22
LINC02560-201ENST00000596379 CLDN6P56747 220 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 NXPH1P58417 271 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 BNIP3Q12983 259 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ARHGAP44Q17R89 818 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ACCSLQ4AC99 568 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 RABGAP1LQ5R372 815 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 CXorf57Q6NSI4 855 aaKnown RBP16.4■□□□□ 0.22
LINC02560-201ENST00000596379 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ENOSF1Q7L5Y1 443 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 PRPF39Q86UA1 669 aaKnown RBP16.4■□□□□ 0.22
LINC02560-201ENST00000596379 CREBRFQ8IUR6 639 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ALG14Q96F25 216 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 RPRD1AQ96P16 312 aaPredicted RBP16.4■□□□□ 0.22
LINC02560-201ENST00000596379 SPAG5Q96R06 1193 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 DDIT4Q9NX09 232 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ARHGAP20Q9P2F6 1191 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 SARDHQ9UL12 918 aa16.4■□□□□ 0.22
LINC02560-201ENST00000596379 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
LINC02560-201ENST00000596379 ASXL3Q9C0F0 2248 aa16.39■□□□□ 0.22
LINC02560-201ENST00000596379 A0A1B0GVM2 712 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 TCAF2A6NFQ2 919 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 BECN2A8MW95 431 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 YKT6O15498 198 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 LATO43561 262 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 GRAP2O75791 330 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 C1SP09871 688 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 JUPP14923 745 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 SLC9A1P19634 815 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 EPHA8P29322 1005 aaPredicted RBP16.39■□□□□ 0.21
LINC02560-201ENST00000596379 MAT2AP31153 395 aaKnown RBP16.39■□□□□ 0.21
LINC02560-201ENST00000596379 OXCT1P55809 520 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 APBA1Q02410 837 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 CENPCQ03188 943 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 AUHQ13825 339 aaKnown RBP16.39■□□□□ 0.21
LINC02560-201ENST00000596379 EFHC1Q5JVL4 640 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 TTC39BQ5VTQ0 682 aaPredicted RBP16.39■□□□□ 0.21
LINC02560-201ENST00000596379 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 TRIM65Q6PJ69 517 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 OR52K2Q8NGK3 314 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 FAM131CQ96AQ9 280 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 PPP1R13BQ96KQ4 1090 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 PPP1R9BQ96SB3 815 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 CPXM1Q96SM3 734 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 FEM1AQ9BSK4 669 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 ERVMER34-1Q9H9K5 563 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 MYLKQ15746 1914 aa16.39■□□□□ 0.21
LINC02560-201ENST00000596379 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 E9PAM4 449 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 PLRG1O43660 514 aaKnown RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 RFPL3O75679 317 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 GLI1P08151 1106 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 CDK4P11802 303 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 RXRGP48443 463 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 VASPP50552 380 aaPredicted RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 IRAK1P51617 712 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 CNTN1Q12860 1018 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 ZNF177Q13360 481 aaPredicted RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 DLG2Q15700 870 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 POM121L1PQ3SYA9 428 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 FAM46CQ5VWP2 391 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 DSG4Q86SJ6 1040 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 SPATS2Q86XZ4 545 aaKnown RBP16.38■□□□□ 0.21
LINC02560-201ENST00000596379 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 OR8D1Q8WZ84 308 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 FAM81BQ96LP2 452 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 ASNSD1Q9NWL6 643 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 SLC25A13Q9UJS0 675 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 VANGL2Q9ULK5 521 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 PPM1HQ9ULR3 514 aa16.38■□□□□ 0.21
LINC02560-201ENST00000596379 A0A087WV48 116 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 MCF2LO15068 1137 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 SLC7A4O43246 635 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 ATP9BO43861 1147 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 HSF2BPO75031 334 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
LINC02560-201ENST00000596379 ZNF18P17022 549 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 HNF1BP35680 557 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 ACADVLP49748 655 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 NME3Q13232 169 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 BECN1Q14457 450 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 STAT4Q14765 748 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 C14orf80Q86SX3 495 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 OXR1Q8N573 874 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 PIP4K2CQ8TBX8 421 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 TSC1Q92574 1164 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 CRELD1Q96HD1 420 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 DCBLD2Q96PD2 775 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 OR51B4Q9Y5P0 310 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 HS3ST4Q9Y661 456 aa16.37■□□□□ 0.21
LINC02560-201ENST00000596379 BNIP3LO60238 219 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 PAGE1O75459 146 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms