RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MESDQ14696 234 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 STARD3Q14849 445 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ACAP1Q15027 740 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 LPAL2Q16609 132 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 PPP6R3Q5H9R7 873 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 C6orf118Q5T5N4 469 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 LINGO4Q6UY18 593 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 SETD3Q86TU7 594 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 TMTC1Q8IUR5 882 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 FAM160A2Q8N612 972 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 FRMD1Q8N878 549 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 RLN3Q8WXF3 142 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 EPAS1Q99814 870 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 SPON2Q9BUD6 331 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 IMPACTQ9P2X3 320 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 VPS51Q9UID3 782 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 REXO2Q9Y3B8 237 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 PCDHA13Q9Y5I0 950 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 ACTL7AQ9Y615 435 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 EPN1Q9Y6I3 576 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 NUMA1Q14980 2115 aa14.14□□□□□ -0.15
SHKBP1-207ENST00000595631 SYNCRIPO60506 623 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 PROSCO94903 275 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 NDUFA10O95299 355 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 MT-CO1P00395 513 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 SRPRAP08240 638 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 RARAP10276 462 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 PLA2G5P39877 138 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 COPAP53621 1224 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 ST8SIA6P61647 398 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 GNA12Q03113 381 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 CAMK2GQ13555 558 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 ATP13A4Q4VNC1 1196 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 KIAA1324Q6UXG2 1013 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 PRR23BQ6ZRT6 265 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 RTL3Q8N8U3 475 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 NETO2Q8NC67 525 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 ACRBPQ8NEB7 543 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 RFFLQ8WZ73 363 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 FAM122AQ96E09 287 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 MRGPRX1Q96LB2 322 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 BAG1Q99933 345 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 MKRN2Q9H000 416 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 NOL6Q9H6R4 1146 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 PRSS16Q9NQE7 514 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 KLHL11Q9NVR0 708 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 MFHAS1Q9Y4C4 1052 aa14.13□□□□□ -0.15
SHKBP1-207ENST00000595631 CCDC163A0A0D9SF12 145 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 RCCD1A6NED2 376 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 EIF3CLB5ME19 914 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 K7ERQ8 282 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 CBX4O00257 560 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SIN3BO75182 1162 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 RPP40O75818 363 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 MTA2O94776 668 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 BCKDHBP21953 392 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 MAPKAPK2P49137 400 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SULT2A1Q06520 285 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SIM2Q14190 667 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SPA17Q15506 151 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 IL31Q6EBC2 164 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 ASCL5Q7RTU5 278 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 DCAF4L2Q8NA75 395 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SUMF1Q8NBK3 374 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 ARHGEF2Q92974 986 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 NKD2Q969F2 451 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 EIF3CQ99613 913 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 NCAPGQ9BPX3 1015 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 ATP13A1Q9HD20 1204 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 CWC15Q9P013 229 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SLC25A13Q9UJS0 675 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 HYOU1Q9Y4L1 999 aa14.12□□□□□ -0.15
SHKBP1-207ENST00000595631 SDK1Q7Z5N4 2213 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 PROB1E7EW31 1015 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 SMAD6O43541 496 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 ZMPSTE24O75844 475 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 CD48P09326 243 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 SRCP12931 536 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 ARF5P84085 180 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 E2F5Q15329 346 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 DPYSL2Q16555 572 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 MAP7D1Q3KQU3 841 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 ACCSLQ4AC99 568 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 ZNF783Q6ZMS7 281 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 LEKR1Q6ZMV7 388 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 CEP68Q76N32 757 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 KBTBD6Q86V97 674 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 TMPRSS6Q8IU80 811 aa14.11□□□□□ -0.15
SHKBP1-207ENST00000595631 RHOT2Q8IXI1 618 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms