RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HNRNPLP14866 589 aaKnown RBP eCLIP20.15■□□□□ 0.82
LSM4-203ENST00000593829 PTPN5P54829 565 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 OXCT1P55809 520 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 DNAJC21Q5F1R6 531 aaKnown RBP20.15■□□□□ 0.82
LSM4-203ENST00000593829 EOGTQ5NDL2 527 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 ADIPOR2Q86V24 386 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 IRF2BPLQ9H1B7 796 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 ZDHHC4Q9NPG8 344 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 PPARGC1AQ9UBK2 798 aaKnown RBP20.15■□□□□ 0.82
LSM4-203ENST00000593829 INTUQ9ULD6 942 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 WDFY4Q6ZS81 3184 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 ATG2BQ96BY7 2078 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 H0Y858 1186 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 NPC1O15118 1278 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 PRPSAP2O60256 369 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 LRCH4O75427 683 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 CNTN5O94779 1100 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 LCA5LO95447 670 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 MIPP30301 263 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 SLC12A1Q13621 1099 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 DMC1Q14565 340 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 SPA17Q15506 151 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 ALFQ53S48 1182 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 MBLAC2Q68D91 279 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 SDE2Q6IQ49 451 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 CHPFQ8IZ52 775 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 NIPA2Q8N8Q9 360 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 BTBD6Q96KE9 485 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 MAGEB5Q9BZ81 275 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 ZYG11BQ9C0D3 744 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 MPP6Q9NZW5 540 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 PCSK1NQ9UHG2 260 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 JRKLQ9Y4A0 524 aa20.15■□□□□ 0.82
LSM4-203ENST00000593829 A6NNZ2 444 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 SGK1O00141 431 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 MOCS3O95396 460 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 POLR2EP19388 210 aaKnown RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 NTSR1P30989 418 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 PCK1P35558 622 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 MAGEA1P43355 309 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ZNF528Q3MIS6 628 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TUBB8Q3ZCM7 444 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 FUT11Q495W5 492 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TTC31Q49AM3 519 aaPredicted RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 ARTNQ5T4W7 220 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TSSK4Q6SA08 328 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TRIM58Q8NG06 486 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ACOX2Q99424 681 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 POLR3BQ9NW08 1133 aaPredicted RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 THAP10Q9P2Z0 257 aaPredicted RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 RAPGEFL1Q9UHV5 662 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TBC1D30Q9Y2I9 924 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 FAM72CH0Y354 149 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ADAM23O75077 832 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ATP5BP06576 529 aaKnown RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 SP9P0CG40 484 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 TNFRSF8P28908 595 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 L1CAMP32004 1257 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 KIF5AQ12840 1032 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 PITRM1Q5JRX3 1037 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ERMARDQ5T6L9 678 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 FAM72AQ5TYM5 149 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 MANEALQ5VSG8 457 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 FAM72DQ6L9T8 149 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 CXorf57Q6NSI4 855 aaKnown RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 FAM72BQ86X60 149 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 PYROXD2Q8N2H3 581 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 FAM76AQ8TAV0 307 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 SORCS1Q8WY21 1168 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 LACRTQ9GZZ8 138 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 USP18Q9UMW8 372 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 SNX12Q9UMY4 172 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 PLA2G4CQ9UP65 541 aa20.14■□□□□ 0.81
LSM4-203ENST00000593829 ARIH1Q9Y4X5 557 aaPredicted RBP20.14■□□□□ 0.81
LSM4-203ENST00000593829 CACNA1IQ9P0X4 2223 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 GOLGA8KD6RF30 607 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 K7ESF4 209 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 PDE2AO00408 941 aaPredicted RBP20.13■□□□□ 0.81
LSM4-203ENST00000593829 LRIG2O94898 1065 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 TDGF1P13385 188 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 CRY1Q16526 586 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 RWDD4Q6NW29 188 aaKnown RBP20.13■□□□□ 0.81
LSM4-203ENST00000593829 CAMKK1Q8N5S9 505 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 SLC35G2Q8TBE7 412 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 TTC17Q96AE7 1141 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 TBC1D31Q96DN5 1066 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 PEBP4Q96S96 227 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 EPAS1Q99814 870 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 SH3GL2Q99962 352 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 RETREG1Q9H6L5 497 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 LUC7LQ9NQ29 371 aaKnown RBP20.13■□□□□ 0.81
LSM4-203ENST00000593829 INTS6Q9UL03 887 aaKnown RBP20.13■□□□□ 0.81
LSM4-203ENST00000593829 AP4E1Q9UPM8 1137 aa20.13■□□□□ 0.81
LSM4-203ENST00000593829 A0A087WUV0 522 aaPredicted RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 RCCD1A6NED2 376 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 DLDP09622 509 aaKnown RBP20.12■□□□□ 0.81
LSM4-203ENST00000593829 CSKP41240 450 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 DGKEP52429 567 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 NRLP54845 237 aa20.12■□□□□ 0.81
LSM4-203ENST00000593829 PLEKHG6Q3KR16 790 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms