RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 LETM1O95202 739 aaPredicted RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 TRUB2O95900 331 aaKnown RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 CDK4P11802 303 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 VAV1P15498 845 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 GPD2P43304 727 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 CLDN6P56747 220 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 PPP2CBP62714 309 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 PPP2CAP67775 309 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 SLC12A1Q13621 1099 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 RABGAP1LQ5R372 815 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 NAPEPLDQ6IQ20 393 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 DENND1BQ6P3S1 775 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 TRIM65Q6PJ69 517 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 BEND5Q7L4P6 421 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 DSG4Q86SJ6 1040 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 CIR1Q86X95 450 aaPredicted RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
PNKP-202ENST00000593706 PIP4K2CQ8TBX8 421 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 PTPRN2Q92932 1015 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 CRELD1Q96HD1 420 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 SPAG5Q96R06 1193 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 THAP9Q9H5L6 903 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 SLC25A13Q9UJS0 675 aa15.19■□□□□ 0.02
PNKP-202ENST00000593706 SYNJ2BP-COX16A0A087WUM0 186 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 A0A1W2PR77 199 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 THAP12O43422 761 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 C1SP09871 688 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 GNA15P30679 374 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 MAT2AP31153 395 aaKnown RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 RPL34P49207 117 aaKnown RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 ACADVLP49748 655 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 NXPH1P58417 271 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 YWHAZP63104 245 aaKnown RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 SEMG2Q02383 582 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 APBA1Q02410 837 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 SULT2A1Q06520 285 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 SHBQ15464 509 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 HES3Q5TGS1 186 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 DPY19L2P1Q6NXN4 242 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 PRPF39Q86UA1 669 aaKnown RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 OR8D1Q8WZ84 308 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 RNF34Q969K3 372 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 BBC3Q96PG8 261 aaPredicted RBP15.18■□□□□ 0.02
PNKP-202ENST00000593706 SIX2Q9NPC8 291 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.18■□□□□ 0.02
PNKP-202ENST00000593706 COX16Q9P0S2 106 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 AK5Q9Y6K8 562 aa15.18■□□□□ 0.02
PNKP-202ENST00000593706 CFAP46Q8IYW2 2715 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 KCNU1A8MYU2 1149 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 MAGEC1O60732 1142 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 DRD3P35462 400 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 PDCLQ13371 301 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 MEA1Q16626 185 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 POM121L1PQ3SYA9 428 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 STK32AQ8WU08 396 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 RPRD1AQ96P16 312 aaPredicted RBP15.17■□□□□ 0.02
PNKP-202ENST00000593706 CRACR2AQ9BSW2 395 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 SLC4A5Q9BY07 1137 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
PNKP-202ENST00000593706 BECN2A8MW95 431 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 C1QTNF3-AMACRE9PGA6 284 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 SLC7A4O43246 635 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 LATO43561 262 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 BNIP3LO60238 219 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 RTN2O75298 545 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 IGLV3-25P01717 112 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 SLC2A3P11169 496 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 ZNF18P17022 549 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 SLC9A1P19634 815 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 PON1P27169 355 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 CCR1P32246 355 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 METAP1P53582 386 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 OXCT1P55809 520 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 PITX1P78337 314 aaPredicted RBP15.16■□□□□ 0.02
PNKP-202ENST00000593706 CDK17Q00537 523 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 CENPCQ03188 943 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 BNIP3Q12983 259 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 TARDBPQ13148 414 aaKnown RBP eCLIP15.16■□□□□ 0.02
PNKP-202ENST00000593706 STAT4Q14765 748 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 SETMARQ53H47 684 aaPredicted RBP15.16■□□□□ 0.02
PNKP-202ENST00000593706 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
PNKP-202ENST00000593706 FAM46CQ5VWP2 391 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 GJB7Q6PEY0 223 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 LRRC69Q6ZNQ3 347 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 MFSD2AQ8NA29 543 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 SHC3Q92529 594 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 PPP1R9BQ96SB3 815 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 KDM4CQ9H3R0 1056 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 ERVMER34-1Q9H9K5 563 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 UBE2TQ9NPD8 197 aaPredicted RBP15.16■□□□□ 0.02
PNKP-202ENST00000593706 APEX2Q9UBZ4 518 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 CYTH4Q9UIA0 394 aa15.16■□□□□ 0.02
PNKP-202ENST00000593706 AJAP1Q9UKB5 411 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms