RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PPP2CAP67775 309 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-207ENST00000593089 TBC1D3GQ6DHY5 549 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 TBC1D3CQ6IPX1 549 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 TBC1D3Q8IZP1 549 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-207ENST00000593089 OR52K2Q8NGK3 314 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 SERAC1Q96JX3 654 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 SPAG5Q96R06 1193 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 SIX2Q9NPC8 291 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 PLCB1Q9NQ66 1216 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 HS3ST4Q9Y661 456 aa21.07■□□□□ 0.96
TRIM47-207ENST00000593089 DMXL2Q8TDJ6 3036 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.06■□□□□ 0.96
TRIM47-207ENST00000593089 A0A1W2PR77 199 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 C10orf142B7Z368 130 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 M0QYT0 321 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 UBE2HP62256 183 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 SLC6A3Q01959 620 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 ZNF177Q13360 481 aaPredicted RBP21.06■□□□□ 0.96
TRIM47-207ENST00000593089 PTPN20Q4JDL3 420 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 SLC47A2Q86VL8 602 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 GALNT15Q8N3T1 639 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 OR8D1Q8WZ84 308 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 ALG14Q96F25 216 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 PPP1R9BQ96SB3 815 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 FEM1AQ9BSK4 669 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 VPS28Q9UK41 221 aa21.06■□□□□ 0.96
TRIM47-207ENST00000593089 FOXN3O00409 490 aaPredicted RBP21.05■□□□□ 0.96
TRIM47-207ENST00000593089 RTN2O75298 545 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 PAGE1O75459 146 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 ITGAVP06756 1048 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 NOS2P35228 1153 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 CLCN1P35523 988 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 SNX16P57768 344 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 SHBQ15464 509 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 POM121L1PQ3SYA9 428 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 C19orf48Q6RUI8 117 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 SLC26A9Q7LBE3 791 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 DSG4Q86SJ6 1040 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 C14orf80Q86SX3 495 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 SIK2Q9H0K1 926 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 GDF3Q9NR23 364 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 SARDHQ9UL12 918 aa21.05■□□□□ 0.96
TRIM47-207ENST00000593089 ADAMTS20P59510 1910 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 FAM149AA5PLN7 773 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 BNIP3LO60238 219 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 HOXB3P14651 431 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-207ENST00000593089 RNASE9P60153 205 aaKnown RBP21.04■□□□□ 0.96
TRIM47-207ENST00000593089 MTA1Q13330 715 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 DLG2Q15700 870 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 MAN2A1Q16706 1144 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 SLC45A4Q5BKX6 768 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 OTUD1Q5VV17 481 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-207ENST00000593089 FAM46CQ5VWP2 391 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 DHRS13Q6UX07 377 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 Q6ZVU0 165 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 MLKLQ8NB16 471 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 MUC3BQ9H195 1237 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 PIGVQ9NUD9 493 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 TPX2Q9ULW0 747 aaKnown RBP21.04■□□□□ 0.96
TRIM47-207ENST00000593089 FREM2Q5SZK8 3169 aa21.04■□□□□ 0.96
TRIM47-207ENST00000593089 COL5A1P20908 1838 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-207ENST00000593089 FAM170AA1A519 330 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 CBX4O00257 560 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 LATO43561 262 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 ATP9BO43861 1147 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 CLDN11O75508 207 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 ZNF18P17022 549 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 TFE3P19532 575 aaPredicted RBP21.03■□□□□ 0.96
TRIM47-207ENST00000593089 MAT2AP31153 395 aaKnown RBP21.03■□□□□ 0.96
TRIM47-207ENST00000593089 SULT1E1P49888 294 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
TRIM47-207ENST00000593089 NAPEPLDQ6IQ20 393 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 PRPF39Q86UA1 669 aaKnown RBP21.03■□□□□ 0.96
TRIM47-207ENST00000593089 ZNF397Q8NF99 534 aaPredicted RBP21.03■□□□□ 0.96
TRIM47-207ENST00000593089 PIP4K2CQ8TBX8 421 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 SAP25Q8TEE9 199 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 FAM131CQ96AQ9 280 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 TKTL2Q9H0I9 626 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 GPSM3Q9Y4H4 160 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 OR51B4Q9Y5P0 310 aa21.03■□□□□ 0.96
TRIM47-207ENST00000593089 ZFYVE26Q68DK2 2539 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 C1QTNF3-AMACRE9PGA6 284 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 TLR4O00206 839 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 SLC7A4O43246 635 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 PLRG1O43660 514 aaKnown RBP21.02■□□□□ 0.96
TRIM47-207ENST00000593089 CNTN5O94779 1100 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 ADCY5O95622 1261 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 LDOC1O95751 146 aaPredicted RBP21.02■□□□□ 0.96
TRIM47-207ENST00000593089 PRKCSHP14314 528 aaPredicted RBP21.02■□□□□ 0.96
TRIM47-207ENST00000593089 ARRB1P49407 418 aaPredicted RBP21.02■□□□□ 0.96
TRIM47-207ENST00000593089 CDH4P55283 916 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 NXPH1P58417 271 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 CNTN1Q12860 1018 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 RAPGEF1Q13905 1077 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 SMAD1Q15797 465 aaKnown RBP21.02■□□□□ 0.96
TRIM47-207ENST00000593089 HSP90AA4PQ58FG1 418 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 FAM71AQ8IYT1 594 aa21.02■□□□□ 0.96
TRIM47-207ENST00000593089 SH2D3CQ8N5H7 860 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms