RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 RSPH1Q8WYR4 309 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 TAS2R1Q9NYW7 299 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 TMEM216Q9P0N5 145 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 COPG2Q9UBF2 871 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 SOX13Q9UN79 622 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 INPP5FQ9Y2H2 1132 aa16.92■□□□□ 0.3
PRKCSH-217ENST00000592741 A0A0U1RQF3 1178 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ITM2AO43736 263 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 LYPLA1O75608 230 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 IGLV3-25P01717 112 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 PRKCGP05129 697 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 MPOP05164 745 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 SERPINA6P08185 405 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 RPSAP08865 295 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TPBGLP0DKB5 382 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 SRGAP2BP0DMP2 458 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 DNAJB2P25686 324 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 CSE1LP55060 971 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 CDH17Q12864 832 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 DSC3Q14574 896 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 RGMBQ6NW40 437 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 CMC1Q7Z7K0 106 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 LINC00523Q86TU6 105 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 OR10T2Q8NGX3 314 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 MFSD3Q96ES6 412 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TSGA13Q96PP4 275 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 APOL2Q9BQE5 337 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 FAM96AQ9H5X1 160 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 C20orf96Q9NUD7 363 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ARHGEF38Q9NXL2 777 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TAGLN3Q9UI15 199 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TDRD15B5MCY1 1934 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 DFFAO00273 331 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TIMM44O43615 452 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ENTPD5O75356 428 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 GNAZP19086 355 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ELF1P32519 619 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 CDK7P50613 346 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 BRMS1LQ5PSV4 323 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 FSTL4Q6MZW2 842 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TREML1Q86YW5 311 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ATPAF2Q8N5M1 289 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TRIB2Q92519 343 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 N4BP2L2Q92802 583 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ATXN7L3BQ96GX2 97 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 ANKRD27Q96NW4 1050 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 TMEM209Q96SK2 561 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 AGAP2Q99490 1192 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 SIK2Q9H0K1 926 aa16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-217ENST00000592741 SPECC1L-ADORA2AF8WAN1 911 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 IRAK2O43187 625 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SEPT4O43236 478 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 RALBP11234 206 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SKIP12755 728 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 HTR7P34969 479 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 NKX3-2P78367 333 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 MPP3Q13368 585 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 RCN2Q14257 317 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 BTBD8Q5XKL5 378 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 LRRTM3Q86VH5 581 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 DPF3Q92784 378 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 ZNF778Q96MU6 729 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 HAPLN3Q96S86 360 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 ADAM2Q99965 735 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 EBF4Q9BQW3 602 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CCDC106Q9BWC9 280 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 DCLRE1BQ9H816 532 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 YY1AP1Q9H869 796 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 ABCC13Q9NSE7 274 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 UBP1Q9NZI7 540 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SORCS3Q9UPU3 1222 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 PATJQ8NI35 1801 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 B2RBV5 119 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 FGF10O15520 208 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CPA3P15088 417 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CCNCP24863 283 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CPA2P48052 419 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 LPIN1Q14693 890 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 TMPRSS6Q8IU80 811 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SPATA2LQ8IUW3 424 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SCAMP5Q8TAC9 235 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 SUSD3Q96L08 255 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CATSPERBQ9H7T0 1116 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 NSMCE4AQ9NXX6 385 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
PRKCSH-217ENST00000592741 AAR2Q9Y312 384 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms