RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ESRRBO95718 433 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 APEHP13798 732 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 PRKCHP24723 683 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 FPR3P25089 353 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 SLC8A1P32418 973 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MPLP40238 635 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 PAFAH1B1P43034 410 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 CCR9P51686 369 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MVDP53602 400 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 TERF1P54274 439 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MRPS35P82673 323 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 GOLGA8FQ08AF8 430 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MPP3Q13368 585 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 KRT32Q14532 448 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 SEC23BQ15437 767 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 CCDC92Q53HC0 331 aaPredicted RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 SLC45A4Q5BKX6 768 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MIIPQ5JXC2 388 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 C1QTNF12Q5T7M4 302 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 HAUS3Q68CZ6 603 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 TMTC3Q6ZXV5 915 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 PEG10Q86TG7 708 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 CHD1LQ86WJ1 897 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 RSPH1Q8WYR4 309 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 AKAP1Q92667 903 aaKnown RBP eCLIP6.89□□□□□ -1.31
VMP1-215ENST00000592619 ANP32BQ92688 251 aaKnown RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 ERP27Q96DN0 273 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 MYCBPQ99417 103 aaPredicted RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 CD180Q99467 661 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 ADGRE3Q9BY15 652 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 SFXN1Q9H9B4 322 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 BEX4Q9NWD9 120 aaPredicted RBP6.89□□□□□ -1.31
VMP1-215ENST00000592619 ACAD8Q9UKU7 415 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 SLC45A1Q9Y2W3 748 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 ROCK1Q13464 1354 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 CNTLNQ9NXG0 1405 aa6.89□□□□□ -1.31
VMP1-215ENST00000592619 PRDM15P57071 1507 aaPredicted RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 PTPRMP28827 1452 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 NCOA1Q15788 1441 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 KIF15Q9NS87 1388 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 SYNRGQ9UMZ2 1314 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 LINC00473A8K010 186 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 GCOM1H8Y6P7 765 aaPredicted RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 TGFB3P10600 412 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 ARSAP15289 507 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 AVPR1BP47901 424 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 WDR5P61964 334 aaKnown RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 DGCR2P98153 550 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 PTP4A2Q12974 167 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 ALKBH1Q13686 389 aaKnown RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 ALDH1L2Q3SY69 923 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 RUNDC3AQ59EK9 446 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 PCID2Q5JVF3 399 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 FNDC7Q5VTL7 733 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 BCDIN3DQ7Z5W3 292 aaKnown RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 ZNF366Q8N895 744 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 NFKBIDQ8NI38 313 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 RNFT2Q96EX2 444 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 INTS2Q9H0H0 1204 aaKnown RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 TLR8Q9NR97 1041 aaKnown RBP6.88□□□□□ -1.31
VMP1-215ENST00000592619 NAALADL1Q9UQQ1 740 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 B3GNT3Q9Y2A9 372 aa6.88□□□□□ -1.31
VMP1-215ENST00000592619 C3P01024 1663 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
VMP1-215ENST00000592619 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 MROH1Q8NDA8 1641 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 DYTNA2CJ06 578 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 PI4KAP2A4QPH2 592 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 NPIPB13A6NJU9 1138 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 TSPAN4O14817 238 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 ORC4O43929 436 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 PDE8BO95263 885 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 MT-CO3P00414 261 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 EBLN1P0CF75 366 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 PRPH2P23942 346 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 HOXD12P35452 270 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 STAT6P42226 847 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 RPS6KA3P51812 740 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 COPB1P53618 953 aaKnown RBP6.87□□□□□ -1.31
VMP1-215ENST00000592619 MTA1Q13330 715 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 GAB1Q13480 694 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 ERV3-1Q14264 604 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 CNGA3Q16281 694 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 ITPRIPL1Q6GPH6 555 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 ZNF804AQ7Z570 1209 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 RPAINQ86UA6 219 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 EGFL6Q8IUX8 553 aa6.87□□□□□ -1.31
VMP1-215ENST00000592619 RFWD2Q8NHY2 731 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms