RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 BTBD19C9JJ37 291 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 HDAC3O15379 428 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 THOP1P52888 689 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 BST2Q10589 180 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 IFRD2Q12894 506 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ANKRD52Q8NB46 1076 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 KBTBD7Q8WVZ9 684 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 MPP4Q96JB8 637 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 CDRT15Q96T59 188 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 MPHOSPH6Q99547 160 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 MRPS26Q9BYN8 205 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 AP4B1Q9Y6B7 739 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF638Q14966 1978 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ZCWPW2A0A1B0GU75 182 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 C2P06681 752 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 IMPDH2P12268 514 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 FLOT2Q14254 428 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 SMAD1Q15797 465 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 LSM12Q3MHD2 195 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF484Q5JVG2 852 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 B3GNT6Q6ZMB0 384 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 RBM44Q6ZP01 1051 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 MCMBPQ9BTE3 642 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 CEP41Q9BYV8 373 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 DRC3Q9H069 523 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 RBM38Q9H0Z9 239 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 PRDM12Q9H4Q4 367 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 MID2Q9UJV3 735 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 PACSIN3Q9UKS6 424 aa15.16■□□□□ 0.02
SMARCA4-219ENST00000592604 STRNO43815 780 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 TNFAIP8O95379 198 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 LTFP02788 710 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 TPP2P29144 1249 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 RANBP1P43487 201 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 IRF9Q00978 393 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 HERC3Q15034 1050 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 ALDH16A1Q8IZ83 802 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 PGAM4Q8N0Y7 254 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 METTL25Q8N6Q8 603 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 OR52K1Q8NGK4 314 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 DLG3Q92796 817 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 ZNF669Q96BR6 464 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 LPIN3Q9BQK8 851 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 WDR55Q9H6Y2 383 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 APOA4P06727 396 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 XRCC1P18887 633 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 YY1P25490 414 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 MATKP42679 507 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 ACADSBP45954 432 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 CSRP3P50461 194 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 RPL14P50914 215 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 PRKAA2P54646 552 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 BCAT1P54687 386 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 CSE1LP55060 971 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 MRPS22P82650 360 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 NADK2Q4G0N4 442 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 TMEM259Q4ZIN3 620 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 PPM1LQ5SGD2 360 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 FAM131BQ86XD5 332 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 RDH11Q8TC12 318 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 COPS5Q92905 334 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 PLEKHG4BQ96PX9 1271 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 AGAP2Q99490 1192 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 ERAP1Q9NZ08 941 aa15.15■□□□□ 0.02
SMARCA4-219ENST00000592604 GOLGA8QA0A0J9YX86 632 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 PRSS51A0A1B0GVH4 220 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 GOLGA8OA6NCC3 632 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 GOLGA8NF8WBI6 632 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 PPEF2O14830 753 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 TIMM44O43615 452 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 LCP1P13796 627 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 INSRRP14616 1297 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 MPSTP25325 297 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 GRM5P41594 1212 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 HSPA13P48723 471 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 MYBPC1Q00872 1141 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 CEACAM7Q14002 265 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 DLG2Q15700 870 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 SLC25A52Q3SY17 297 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 SEL1L3Q68CR1 1132 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 PID1Q7Z2X4 250 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 LILRA2Q8N149 483 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 C7orf31Q8N865 590 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 CCNYQ8ND76 341 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 ATXN7L3BQ96GX2 97 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 AGAP3Q96P47 875 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 BFARQ9NZS9 450 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 DERAQ9Y315 318 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 AP2A1O95782 977 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 CHRNGP07510 517 aa15.14■□□□□ 0.01
SMARCA4-219ENST00000592604 SRGAP2BP0DMP2 458 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms