RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MAGEC1O60732 1142 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 ERCC5P28715 1186 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-205ENST00000592333 CDH4P55283 916 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 CCDC15Q0P6D6 951 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 SCAPQ12770 1279 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 KCNJ12Q14500 433 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 FAM183BPQ6ZVS7 135 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 IQCHQ86VS3 1027 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 OXR1Q8N573 874 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 TMEM35BQ8NCS4 154 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 OR8D1Q8WZ84 308 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 NDST4Q9H3R1 872 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 ARHGEF38Q9NXL2 777 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 DACH1Q9UI36 760 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 DMTF1Q9Y222 760 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 PCDHGA1Q9Y5H4 931 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 COL5A1P20908 1838 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-205ENST00000592333 A0A1W2PR77 199 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 E9PAM4 449 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 M0QYT0 321 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 FOXN3O00409 490 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-205ENST00000592333 ATXN1LP0C7T5 689 aaKnown RBP19.4■□□□□ 0.7
CCDC43-205ENST00000592333 GABRB2P47870 512 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 PSMD8P48556 350 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 ARRB1P49407 418 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-205ENST00000592333 CXCR3P49682 368 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 KRT83P78385 493 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 KCNT1Q5JUK3 1230 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 OR14C36Q8NHC7 312 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 C1orf74Q96LT6 269 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 SLC6A18Q96N87 628 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 NPY6RQ99463 290 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 CCDC86Q9H6F5 360 aaKnown RBP19.4■□□□□ 0.7
CCDC43-205ENST00000592333 EBF2Q9HAK2 575 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 GDF3Q9NR23 364 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 PPM1HQ9ULR3 514 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 HS3ST2Q9Y278 367 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 BTBD3Q9Y2F9 522 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 OR51B4Q9Y5P0 310 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 HS3ST4Q9Y661 456 aa19.4■□□□□ 0.7
CCDC43-205ENST00000592333 ANKRD11Q6UB99 2663 aaPredicted RBP19.39■□□□□ 0.7
CCDC43-205ENST00000592333 FREM2Q5SZK8 3169 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3DA0A087WVF3 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3IA0A087WXS9 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3EA0A087X179 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3KA0A087X1G2 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3FA6NER0 549 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3LB9A6J9 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 C1QTNF3-AMACRE9PGA6 284 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 PLRG1O43660 514 aaKnown RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 ERBB2P04626 1255 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 C1SP09871 688 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3HP0C7X1 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 DRD3P35462 400 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 STK19P49842 368 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 SMAD1Q15797 465 aaKnown RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 PTPN20Q4JDL3 420 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 VWA3BQ502W6 1294 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3GQ6DHY5 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3CQ6IPX1 549 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 NAPEPLDQ6IQ20 393 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 ARCQ7LC44 396 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 SETD3Q86TU7 594 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 PRPF39Q86UA1 669 aaKnown RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 SLC47A2Q86VL8 602 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TRIM69Q86WT6 500 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 PASD1Q8IV76 773 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TBC1D3Q8IZP1 549 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 MFSD2AQ8NA29 543 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 WDCPQ9H6R7 721 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 AASDHPPTQ9NRN7 309 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 FTSJ1Q9UET6 329 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 VANGL2Q9ULK5 521 aa19.39■□□□□ 0.69
CCDC43-205ENST00000592333 FARP1Q9Y4F1 1045 aaPredicted RBP19.39■□□□□ 0.69
CCDC43-205ENST00000592333 TLR4O00206 839 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 TAF4O00268 1085 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 RNGTTO60942 597 aaKnown RBP19.38■□□□□ 0.69
CCDC43-205ENST00000592333 PAGE1O75459 146 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 GRAP2O75791 330 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 LSM8O95777 96 aaKnown RBP19.38■□□□□ 0.69
CCDC43-205ENST00000592333 RXRGP48443 463 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 APBA1Q02410 837 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 NME3Q13232 169 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 NEK5Q6P3R8 708 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 SH2D3CQ8N5H7 860 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 MSANTD4Q8NCY6 345 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 TMEM131Q92545 1883 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 SERAC1Q96JX3 654 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 CCDC114Q96M63 670 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 TUBGCP2Q9BSJ2 902 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 C2orf49Q9BVC5 232 aaPredicted RBP19.38■□□□□ 0.69
CCDC43-205ENST00000592333 NYNRINQ9P2P1 1898 aaKnown RBP19.38■□□□□ 0.69
CCDC43-205ENST00000592333 VPS28Q9UK41 221 aa19.38■□□□□ 0.69
CCDC43-205ENST00000592333 PTPRBP23467 1997 aa19.37■□□□□ 0.69
CCDC43-205ENST00000592333 PLXNB3Q9ULL4 1909 aa19.37■□□□□ 0.69
CCDC43-205ENST00000592333 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
CCDC43-205ENST00000592333 CXorf51AA0A1B0GTR3 108 aa19.37■□□□□ 0.69
CCDC43-205ENST00000592333 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
CCDC43-205ENST00000592333 KCNK3O14649 394 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms