RNA–Protein interactions for RNA: ENST00000591989.5

NEDD4L-233, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 233 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-233ENST00000591989 TEX33O43247 280 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 CNTN5O94779 1100 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 GJB6O95452 261 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 SYPP08247 313 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 MMP8P22894 467 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 CDH4P55283 916 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 ZBTB16Q05516 673 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 ZCCHC9Q8N567 271 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 KDM1BQ8NB78 822 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 OR52K2Q8NGK3 314 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 OR2I1PQ8NGU4 316 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 NT5C3BQ969T7 300 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 PGAP3Q96FM1 320 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 C6orf106Q9H6K1 298 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 CAPN10Q9HC96 672 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 FBXL12Q9NXK8 326 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 SLC25A13Q9UJS0 675 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 VPS28Q9UK41 221 aa12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-233ENST00000591989 A0A1B0GTW7 788 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 I6L893 689 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 MID1O15344 667 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 BNIP3LO60238 219 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 CLDN11O75508 207 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 FSBPO95073 299 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 SEMA4FO95754 770 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 IGLV3-19P01714 112 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 RHOCP08134 193 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 CEACAM1P13688 526 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 CSRP1P21291 193 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 SLC8A1P32418 973 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 RDXP35241 583 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 PSMD8P48556 350 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 FILIP1LQ4L180 1135 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 ALFQ53S48 1182 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 APTXQ7Z2E3 356 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 MINDY1Q8N5J2 469 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 JOSD2Q8TAC2 188 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 PTPRN2Q92932 1015 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 AGPAT1Q99943 283 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 OMDQ99983 421 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 FEM1AQ9BSK4 669 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 SELENOOQ9BVL4 669 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 PABPC3Q9H361 631 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 SGK2Q9HBY8 427 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 MPP6Q9NZW5 540 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 ADAM22Q9P0K1 906 aa12.72□□□□□ -0.37
NEDD4L-233ENST00000591989 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 DOCK4Q8N1I0 1966 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 PCDH15Q96QU1 1955 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 A0A1W2PP55 124 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 E9PAM4 449 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 OPHN1O60890 802 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 RNASEH2AO75792 299 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 IL1BP01584 269 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 KRT3P12035 628 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 VAV1P15498 845 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 FERP16591 822 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 SDC4P31431 198 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 ZNF165P49910 485 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 PLK1P53350 603 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 SFSWAPQ12872 951 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 CST6Q15828 149 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 CLEC16AQ2KHT3 1053 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 C5orf22Q49AR2 442 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 RAB6CQ53S08 254 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 DEFB124Q8NES8 71 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 ALG14Q96F25 216 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 C1orf74Q96LT6 269 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 FAM129BQ96TA1 746 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 BPIFA3Q9BQP9 254 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 RAB6CQ9H0N0 254 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 NEUROG2Q9H2A3 272 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 TMEM51Q9NW97 253 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 KLK13Q9UKR3 277 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 SCML1Q9UN30 329 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 NEUROG3Q9Y4Z2 214 aa12.71□□□□□ -0.37
NEDD4L-233ENST00000591989 ITIH6Q6UXX5 1313 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms