RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 RPL7AP62424 266 aaKnown RBP27.97■■■□□ 2.07
SMAD4-213ENST00000591914 IRX4P78413 519 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 TRIM61Q5EBN2 209 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 SLC23A3Q6PIS1 610 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 TFAP2DQ7Z6R9 452 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 FRS2Q8WU20 508 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 PTPRN2Q92932 1015 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 MCEEQ96PE7 176 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 ZYG11BQ9C0D3 744 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 MUC3BQ9H195 1237 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 OSBPL2Q9H1P3 480 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 OR12D3Q9UGF7 316 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 SCML1Q9UN30 329 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 ANKRD62A6NC57 917 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 RNASEH1O60930 286 aaKnown RBP27.96■■■□□ 2.07
SMAD4-213ENST00000591914 KLHL30Q0D2K2 578 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 TTC31Q49AM3 519 aaPredicted RBP27.96■■■□□ 2.07
SMAD4-213ENST00000591914 SYCP2LQ5T4T6 812 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 C6orf118Q5T5N4 469 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 MANEALQ5VSG8 457 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 RABEPKQ7Z6M1 372 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 FAM124AQ86V42 546 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 CEP76Q8TAP6 659 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 NTAN1Q96AB6 310 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 FAM129BQ96TA1 746 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 PSMB7Q99436 277 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 PCED1AQ9H1Q7 454 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 SLC25A13Q9UJS0 675 aa27.96■■■□□ 2.07
SMAD4-213ENST00000591914 TMCO5BA8MYB1 307 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 CCP110O43303 1012 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 ATP9BO43861 1147 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 GZMAP12544 262 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 OR1E1P30953 314 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 DUOXA1Q1HG43 343 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 WDR45BQ5MNZ6 344 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 CCDC185Q8N715 623 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 DNASE2BQ8WZ79 361 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 CNPY3Q9BT09 278 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 C2orf49Q9BVC5 232 aaPredicted RBP27.95■■■□□ 2.06
SMAD4-213ENST00000591914 NUSAP1Q9BXS6 441 aaKnown RBP27.95■■■□□ 2.06
SMAD4-213ENST00000591914 PABPC3Q9H361 631 aaKnown RBP27.95■■■□□ 2.06
SMAD4-213ENST00000591914 IFNKQ9P0W0 207 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 PI4KAP42356 2102 aa27.95■■■□□ 2.06
SMAD4-213ENST00000591914 METTL12A8MUP2 240 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 DDX3XO00571 662 aaKnown RBP eCLIP27.94■■■□□ 2.062e-13■□□□□ 10.8
SMAD4-213ENST00000591914 ACSL1P33121 698 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 SCAPQ12770 1279 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 ELAVL3Q14576 367 aaKnown RBP27.94■■■□□ 2.06
SMAD4-213ENST00000591914 CST6Q15828 149 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 ZNF783Q6ZMS7 281 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 USP30Q70CQ3 517 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 SYN2Q92777 582 aaPredicted RBP27.94■■■□□ 2.06
SMAD4-213ENST00000591914 IQCDQ96DY2 449 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 HS3ST2Q9Y278 367 aa27.94■■■□□ 2.06
SMAD4-213ENST00000591914 A0A0D9SEW6 157 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 ILVBLA1L0T0 632 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 DCDC2BA2VCK2 349 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 TM4SF5O14894 197 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 SERPINF2P08697 491 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 SKILP12757 684 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 VAV1P15498 845 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 KRT83P78385 493 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 FOXK2Q01167 660 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 MAMLD1Q13495 774 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 PLEKHA7Q6IQ23 1121 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 DCUN1D2Q6PH85 259 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 MMAAQ8IVH4 418 aaKnown RBP27.93■■■□□ 2.06
SMAD4-213ENST00000591914 RGL4Q8IZJ4 473 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 STK40Q8N2I9 435 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 SH2D3CQ8N5H7 860 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 DCAF4L2Q8NA75 395 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 BTBD1Q9H0C5 482 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 RETREG1Q9H6L5 497 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 CAPN10Q9HC96 672 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 PARVAQ9NVD7 372 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 VPS51Q9UID3 782 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 SLC6A14Q9UN76 642 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 NEU3Q9UQ49 428 aa27.93■■■□□ 2.06
SMAD4-213ENST00000591914 NUMA1Q14980 2115 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 MEI4A8MW99 385 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 FAM72CH0Y354 149 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 CDX4O14627 284 aaPredicted RBP27.92■■■□□ 2.06
SMAD4-213ENST00000591914 CFIP05156 583 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 FAM72AQ5TYM5 149 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 DCAF12L1Q5VU92 463 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 HGSNATQ68CP4 663 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 IL31Q6EBC2 164 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 FAM72DQ6L9T8 149 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 FAM72BQ86X60 149 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 MAGEB5Q9BZ81 275 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 SGK2Q9HBY8 427 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 SUSD2Q9UGT4 822 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 CAPN11Q9UMQ6 739 aa27.92■■■□□ 2.06
SMAD4-213ENST00000591914 MID1O15344 667 aa27.91■■■□□ 2.06
SMAD4-213ENST00000591914 SNAP91O60641 907 aa27.91■■■□□ 2.06
SMAD4-213ENST00000591914 SEMA4FO95754 770 aa27.91■■■□□ 2.06
SMAD4-213ENST00000591914 FTLP02792 175 aaPredicted RBP27.91■■■□□ 2.06
SMAD4-213ENST00000591914 PLEKP08567 350 aaPredicted RBP27.91■■■□□ 2.06
SMAD4-213ENST00000591914 MAOBP27338 520 aa27.91■■■□□ 2.06
SMAD4-213ENST00000591914 ZBED6P86452 979 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms