RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 DLL3Q9NYJ7 618 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ADAMTS1Q9UHI8 967 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 VPS28Q9UK41 221 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 PILRBQ9UKJ0 227 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 NEU3Q9UQ49 428 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 LUC7L2Q9Y383 392 aaKnown RBP22.95■■□□□ 1.26
MBD3-208ENST00000590830 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.94■■□□□ 1.26
MBD3-208ENST00000590830 TARSL2A2RTX5 802 aaKnown RBP22.94■■□□□ 1.26
MBD3-208ENST00000590830 TMEM191CA6NGB0 347 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 SNAP91O60641 907 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 MT-CO1P00395 513 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 ACADMP11310 421 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 CASP14P31944 242 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 VASPP50552 380 aaPredicted RBP22.94■■□□□ 1.26
MBD3-208ENST00000590830 ZNF252P-AS1Q0IIN9 211 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 SETD3Q86TU7 594 aaPredicted RBP22.94■■□□□ 1.26
MBD3-208ENST00000590830 FAM124AQ86V42 546 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 PYROXD2Q8N2H3 581 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 ARFGAP1Q8N6T3 406 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 OR7D4Q8NG98 312 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 PPP1R9BQ96SB3 815 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 MUC3BQ9H195 1237 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 NDFIP2Q9NV92 336 aa22.94■■□□□ 1.26
MBD3-208ENST00000590830 GON4LQ3T8J9 2241 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 ATXN2Q99700 1313 aaKnown RBP22.93■■□□□ 1.26
MBD3-208ENST00000590830 EDDM13A0A1B0GTR0 161 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 ATP9BO43861 1147 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 NDUFS2O75306 463 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 SERPING1P05155 500 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 OXTRP30559 389 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 OR1E1P30953 314 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 SCAPQ12770 1279 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 PEAR1Q5VY43 1037 aaPredicted RBP22.93■■□□□ 1.26
MBD3-208ENST00000590830 SCYL2Q6P3W7 929 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 SLFN11Q7Z7L1 901 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 NLRP14Q86W24 1093 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 SYT12Q8IV01 421 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 STK40Q8N2I9 435 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 IQCDQ96DY2 449 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 HSPA12BQ96MM6 686 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 GPR174Q9BXC1 333 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 CNOT8Q9UFF9 292 aaKnown RBP22.93■■□□□ 1.26
MBD3-208ENST00000590830 VPS51Q9UID3 782 aa22.93■■□□□ 1.26
MBD3-208ENST00000590830 BZW2Q9Y6E2 419 aaKnown RBP22.93■■□□□ 1.26
MBD3-208ENST00000590830 RALGAPA1Q6GYQ0 2036 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 ILVBLA1L0T0 632 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 ANKRD62A6NC57 917 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 FOXD2O60548 495 aaPredicted RBP22.92■■□□□ 1.26
MBD3-208ENST00000590830 LRIG2O94898 1065 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 GLDCP23378 1020 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 IRX4P78413 519 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 ZBTB16Q05516 673 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 TDRD12Q587J7 1177 aaKnown RBP22.92■■□□□ 1.26
MBD3-208ENST00000590830 C6orf118Q5T5N4 469 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 ZNF776Q68DI1 518 aaPredicted RBP22.92■■□□□ 1.26
MBD3-208ENST00000590830 TMC6Q7Z403 805 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 C12orf50Q8NA57 414 aaPredicted RBP22.92■■□□□ 1.26
MBD3-208ENST00000590830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.92■■□□□ 1.26
MBD3-208ENST00000590830 ARHGAP20Q9P2F6 1191 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 FZD10Q9ULW2 581 aa22.92■■□□□ 1.26
MBD3-208ENST00000590830 LAMA1P25391 3075 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 A0A087X0T9 212 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 K7ERQ8 282 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 DNTTP04053 509 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 FAM228BP0C875 321 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 ACSL1P33121 698 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 NNMTP40261 264 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 DLG2Q15700 870 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 AASDHQ4L235 1098 aaPredicted RBP22.91■■□□□ 1.26
MBD3-208ENST00000590830 RWDD4Q6NW29 188 aaKnown RBP22.91■■□□□ 1.26
MBD3-208ENST00000590830 MMAAQ8IVH4 418 aaKnown RBP22.91■■□□□ 1.26
MBD3-208ENST00000590830 DRC7Q8IY82 874 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 SH2D3CQ8N5H7 860 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 ZNF653Q96CK0 615 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 PABPC3Q9H361 631 aaKnown RBP22.91■■□□□ 1.26
MBD3-208ENST00000590830 SERGEFQ9UGK8 458 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 HS3ST2Q9Y278 367 aa22.91■■□□□ 1.26
MBD3-208ENST00000590830 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.91■■□□□ 1.26
MBD3-208ENST00000590830 KHNYNO15037 678 aaKnown RBP22.9■■□□□ 1.26
MBD3-208ENST00000590830 MID1O15344 667 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 CBFA2T2O43439 604 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 SMAD6O43541 496 aaKnown RBP22.9■■□□□ 1.26
MBD3-208ENST00000590830 ZMPSTE24O75844 475 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 SRCP12931 536 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 RHOQP17081 205 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 PSMA2P25787 234 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 MAOBP27338 520 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 HNRNPH3P31942 346 aaKnown RBP22.9■■□□□ 1.26
MBD3-208ENST00000590830 L1CAMP32004 1257 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 CST6Q15828 149 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 SPECC1LQ69YQ0 1117 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 LINGO4Q6UY18 593 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 CADM4Q8NFZ8 388 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 NETO1Q8TDF5 533 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 SPON2Q9BUD6 331 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 MYO1AQ9UBC5 1043 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 SLC25A13Q9UJS0 675 aa22.9■■□□□ 1.26
MBD3-208ENST00000590830 TNRC6BQ9UPQ9 1833 aaKnown RBP22.89■■□□□ 1.26
MBD3-208ENST00000590830 NUP205Q92621 2012 aa22.89■■□□□ 1.26
MBD3-208ENST00000590830 LNP1A1A4G5 178 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms