RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 THPOP40225 353 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 PLIN5Q00G26 463 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 MFSD10Q14728 455 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 LPCAT4Q643R3 524 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 SPATA6LQ8N4H0 392 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 SNX19Q92543 992 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 QKIQ96PU8 341 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 MUC3BQ9H195 1237 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 DDX18Q9NVP1 670 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 LNPEPQ9UIQ6 1025 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 SLC30A1Q9Y6M5 507 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 ITGB4P16144 1822 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 RGSL1A5PLK6 1076 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 GLP2RO95838 553 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 ERCC2P18074 760 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 SLC18A1P54219 525 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 KLF1Q13351 362 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 TBCELQ5QJ74 424 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 RNF220Q5VTB9 566 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 ASIC4Q96FT7 647 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 OMDQ99983 421 aa17.43■□□□□ 0.38
SMARCA4-215ENST00000590574 GSCP56915 257 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 EFEMP1Q12805 493 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PCID2Q5JVF3 399 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 NDRG1Q92597 394 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 S100A14Q9HCY8 104 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 RHBDL2Q9NX52 303 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 LRP5O75197 1615 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TBC1D4O60343 1298 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PEX11AO75192 247 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 ZNF23P17027 643 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 VWA5B1Q5TIE3 1220 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 GPC2Q8N158 579 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 FAM162AQ96A26 154 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CINPQ9BW66 212 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 UPP2O95045 317 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 POMCP01189 267 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 ALBP02768 609 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TWF1Q12792 350 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TRMT10BQ6PF06 316 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 RHBDF2Q6PJF5 856 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PCDH19Q8TAB3 1148 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 SENP8Q96LD8 212 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PRKD2Q9BZL6 878 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 GRIP2Q9C0E4 1043 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 COPG2Q9UBF2 871 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 A0A087X1B8 175 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 GPR182O15218 404 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 SIN3BO75182 1162 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 DAB1O75553 588 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CSH1P0DML2 217 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CSH2P0DML3 217 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 FGFR3P22607 806 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 NRF1Q16656 503 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CA9Q16790 459 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 CCDC185Q8N715 623 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 ZFRQ96KR1 1074 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PRPF18Q99633 342 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TBC1D23Q9NUY8 699 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 TAS2R1Q9NYW7 299 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 RAP2CQ9Y3L5 183 aa17.42■□□□□ 0.38
SMARCA4-215ENST00000590574 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SLC25A52Q3SY17 297 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SGO1Q5FBB7 561 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 MARC1Q5VT66 337 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 TAS1R3Q7RTX0 852 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 FBXW8Q8N3Y1 598 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ADAM7Q9H2U9 754 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 TRMT6Q9UJA5 497 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 MDM4O15151 490 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 HDAC3O15379 428 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 GCATO75600 419 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PGM3O95394 542 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 BDNFP23560 247 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SLC25A11Q02978 314 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ACSBG2Q5FVE4 666 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 LBX2Q6XYB7 198 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 MARK2Q7KZI7 788 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PYROXD2Q8N2H3 581 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 RCN3Q96D15 328 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ACSS2Q9NR19 701 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 C16orf96A6NNT2 1141 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 ABLIM1O14639 778 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 MSCO60682 206 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 IRF1P10914 325 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PIK3R1P27986 724 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 C9orf57Q5W0N0 161 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 HPS6Q86YV9 775 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 APOL5Q9BWW9 433 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 STRA6Q9BX79 667 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 PKP3Q9Y446 797 aa17.41■□□□□ 0.38
SMARCA4-215ENST00000590574 SMNDC1O75940 238 aaKnown RBP eCLIP17.41■□□□□ 0.381e-8■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms