RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 IER2Q9BTL4 223 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 SPON2Q9BUD6 331 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 MAGEH1Q9H213 219 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 ZDHHC4Q9NPG8 344 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 HCN2Q9UL51 889 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 PCDHA3Q9Y5H8 950 aa19.63■□□□□ 0.73
DDX39A-214ENST00000590556 CCDC66A2RUB6 948 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 CHURC1-FNTBB4DL54 471 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 KLF8O95600 359 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 FTCDO95954 541 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 CHRM1P11229 460 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 HNRNPLP14866 589 aaKnown RBP eCLIP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 CTNNA2P26232 953 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 CTNNA1P35221 906 aaKnown RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 MARCKSL1P49006 195 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 ECT2LQ008S8 904 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 GAS6Q14393 721 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 POLD3Q15054 466 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 HSF5Q4G112 596 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 PKN3Q6P5Z2 889 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 TMCO3Q6UWJ1 677 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 SPEM1Q8N4L4 309 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 CCDC33Q8N5R6 958 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 IL17RCQ8NAC3 791 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 KRT35Q92764 455 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 ACDQ96AP0 544 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 RNF25Q96BH1 459 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 ALS2CR12Q96Q35 445 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 C2orf49Q9BVC5 232 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 NOL6Q9H6R4 1146 aaKnown RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 TRMT1Q9NXH9 659 aaKnown RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 THAP10Q9P2Z0 257 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
DDX39A-214ENST00000590556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
DDX39A-214ENST00000590556 NUP205Q92621 2012 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 C3orf70A6NLC5 250 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 DCLK1O15075 740 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 NPC1O15118 1278 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ZRANB2O95218 330 aaKnown RBP eCLIP19.61■□□□□ 0.733e-7■■■■□ 25.7
DDX39A-214ENST00000590556 ACVRL1P37023 503 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 CTSOP43234 321 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 NDST2P52849 883 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 YBEYP58557 167 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 MTAPQ13126 283 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 PARP15Q460N3 678 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 IL31Q6EBC2 164 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 SDE2Q6IQ49 451 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 VSIG1Q86XK7 387 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 REXO1L1PQ8IX06 675 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 RCOR2Q8IZ40 523 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 CHPFQ8IZ52 775 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 LZTR1Q8N653 840 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 DTWD2Q8NBA8 298 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 TXNDC5Q8NBS9 432 aaKnown RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 PCDH19Q8TAB3 1148 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ARHGEF2Q92974 986 aaKnown RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 FAF2Q96CS3 445 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ACOX2Q99424 681 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 PSMB7Q99436 277 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 MAK16Q9BXY0 300 aaKnown RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ATP13A1Q9HD20 1204 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ETNK2Q9NVF9 386 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 SPATA6Q9NWH7 488 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-214ENST00000590556 ERVW-1Q9UQF0 538 aa19.61■□□□□ 0.73
DDX39A-214ENST00000590556 MIF4GDA9UHW6 222 aaKnown RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 ZNF487B1APH4 448 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 RASA4BC9J798 803 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 CBX4O00257 560 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 RASA4O43374 803 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 SNAP91O60641 907 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 SRPRAP08240 638 aaKnown RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 NTSR1P30989 418 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 WASP42768 502 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 ST8SIA6P61647 398 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 ZNF234Q14588 700 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 PTPRNQ16849 979 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 EOGTQ5NDL2 527 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 MFSD7Q6UXD7 560 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 ZNF354CQ86Y25 554 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 UBL4BQ8N7F7 174 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 DCAF4L2Q8NA75 395 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 TRIM58Q8NG06 486 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 EXD1Q8NHP7 514 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 RBM41Q96IZ5 413 aaKnown RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 CELF6Q96J87 481 aaKnown RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 RNF157Q96PX1 679 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 LRFN3Q9BTN0 628 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 ACE2Q9BYF1 805 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 KLC2Q9H0B6 622 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 CACNA2D2Q9NY47 1150 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 SLC25A13Q9UJS0 675 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 HPCAL4Q9UM19 191 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 PACSIN2Q9UNF0 486 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-214ENST00000590556 MFHAS1Q9Y4C4 1052 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 STON1Q9Y6Q2 735 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 CHD5Q8TDI0 1954 aa19.6■□□□□ 0.73
DDX39A-214ENST00000590556 SGK1O00141 431 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 IL12RB1P42701 662 aa19.59■□□□□ 0.73
DDX39A-214ENST00000590556 PEX5P50542 639 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms