RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 GOLGA4Q13439 2230 aaKnown RBP13.04□□□□□ -0.32
RFX1-207ENST00000589937 MYLKQ15746 1914 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 LAMA5O15230 3695 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 C10orf142B7Z368 130 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 H0Y8X5 98 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 K7ERQ8 282 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 BNIP3LO60238 219 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 RTN2O75298 545 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 MT-CO1P00395 513 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 IL1BP01584 269 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 SLC2A3P11169 496 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 CHRNB2P17787 502 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 GLDCP23378 1020 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 CD27P26842 260 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 NOS2P35228 1153 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 GRIA4P48058 902 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 CXCR3P49682 368 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 NOMO3P69849 1222 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 PRAMEF14Q5SWL7 426 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 EMC1Q8N766 993 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 CFAP57Q96MR6 1250 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 OMDQ99983 421 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 ZDHHC5Q9C0B5 715 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 CAAP1Q9H8G2 361 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFX1-207ENST00000589937 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 NOCTQ9UK39 431 aaKnown RBP13.03□□□□□ -0.32
RFX1-207ENST00000589937 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
RFX1-207ENST00000589937 COL5A1P20908 1838 aaPredicted RBP13.02□□□□□ -0.32
RFX1-207ENST00000589937 ANKRD11Q6UB99 2663 aaPredicted RBP13.02□□□□□ -0.32
RFX1-207ENST00000589937 TARSL2A2RTX5 802 aaKnown RBP13.02□□□□□ -0.33
RFX1-207ENST00000589937 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
RFX1-207ENST00000589937 EEF1GP26641 437 aaKnown RBP13.02□□□□□ -0.33
RFX1-207ENST00000589937 CTSKP43235 329 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 GABRB2P47870 512 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 PLK1P53350 603 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 SLC14A1Q13336 389 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
RFX1-207ENST00000589937 LINGO4Q6UY18 593 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 FAM131BQ86XD5 332 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 KDM1BQ8NB78 822 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 OR14C36Q8NHC7 312 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 ZCCHC14Q8WYQ9 949 aaKnown RBP13.02□□□□□ -0.33
RFX1-207ENST00000589937 NT5C3BQ969T7 300 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 NLRC4Q9NPP4 1024 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 TOR4AQ9NXH8 423 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 NEUROG3Q9Y4Z2 214 aa13.02□□□□□ -0.33
RFX1-207ENST00000589937 TRPM6Q9BX84 2022 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 CBX4O00257 560 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 ADH1BP00325 375 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 CTSLP07711 333 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 SRCP12931 536 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 RRM1P23921 792 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 MAT2AP31153 395 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 JAM2P57087 298 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 FMO1Q01740 532 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 ZNF177Q13360 481 aaPredicted RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 DLG2Q15700 870 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 C15orf59Q2T9L4 293 aaPredicted RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 C5orf22Q49AR2 442 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 ACCSLQ4AC99 568 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 CLEC17AQ6ZS10 378 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 RBM43Q6ZSC3 357 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 ADAT2Q7Z6V5 191 aaKnown RBP13.01□□□□□ -0.33
RFX1-207ENST00000589937 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 OR7D4Q8NG98 312 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 OR2T34Q8NGX1 318 aa13.01□□□□□ -0.33
RFX1-207ENST00000589937 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms