RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SKA1Q96BD8 255 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 ALG14Q96F25 216 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 FAM81BQ96LP2 452 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 SPAG5Q96R06 1193 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 ASNSD1Q9NWL6 643 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 FTSJ1Q9UET6 329 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 SARDHQ9UL12 918 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 PCDHGC3Q9UN70 934 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 RAXQ9Y2V3 346 aa16.77■□□□□ 0.28
MBD3-206ENST00000589901 TMEM131Q92545 1883 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 CBX4O00257 560 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 RTN2O75298 545 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 PNMA6AP0CW24 399 aaPredicted RBP16.76■□□□□ 0.27
MBD3-206ENST00000589901 INAVAQ3KP66 663 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 DHRS13Q6UX07 377 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
MBD3-206ENST00000589901 C14orf80Q86SX3 495 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 GALNT15Q8N3T1 639 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 PLCB1Q9NQ66 1216 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 HS3ST4Q9Y661 456 aa16.76■□□□□ 0.27
MBD3-206ENST00000589901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.75■□□□□ 0.27
MBD3-206ENST00000589901 TRABD2BA6NFA1 517 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 TLR4O00206 839 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 LATO43561 262 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 NXPH1P58417 271 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 PTK2Q05397 1052 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 ZNF177Q13360 481 aaPredicted RBP16.75■□□□□ 0.27
MBD3-206ENST00000589901 CAMK2BQ13554 666 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 SMAD1Q15797 465 aaKnown RBP16.75■□□□□ 0.27
MBD3-206ENST00000589901 POM121L1PQ3SYA9 428 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 PTPN20Q4JDL3 420 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 OTUD1Q5VV17 481 aaPredicted RBP16.75■□□□□ 0.27
MBD3-206ENST00000589901 SLC47A2Q86VL8 602 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 SAP25Q8TEE9 199 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 FAM131CQ96AQ9 280 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 FEM1AQ9BSK4 669 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 GDF3Q9NR23 364 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 ARHGAP20Q9P2F6 1191 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 PLXNA2O75051 1894 aa16.75■□□□□ 0.27
MBD3-206ENST00000589901 APC2O95996 2303 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 GTPBP10A4D1E9 387 aaKnown RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 M0QYT0 321 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 FOXN3O00409 490 aaPredicted RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 ATP9BO43861 1147 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 PAGE1O75459 146 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 DAB1O75553 588 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 ITGAVP06756 1048 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 TFE3P19532 575 aaPredicted RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 MAT2AP31153 395 aaKnown RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 CLCN1P35523 988 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 KRT9P35527 623 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 OXCT1P55809 520 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 CLDN6P56747 220 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 SLC6A3Q01959 620 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 CYP4F3Q08477 520 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 COL9A2Q14055 689 aaPredicted RBP16.74■□□□□ 0.27
MBD3-206ENST00000589901 DLG2Q15700 870 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 COL28A1Q2UY09 1125 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 Q6ZVU0 165 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 SLC26A9Q7LBE3 791 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 OR8D1Q8WZ84 308 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 NOX5Q96PH1 765 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 SIK2Q9H0K1 926 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 SLC25A13Q9UJS0 675 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 VPS28Q9UK41 221 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 PPM1HQ9ULR3 514 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 OR51B4Q9Y5P0 310 aa16.74■□□□□ 0.27
MBD3-206ENST00000589901 PTPRBP23467 1997 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 FAM170AA1A519 330 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 I6L893 689 aaPredicted RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 ENC1O14682 589 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 PLRG1O43660 514 aaKnown RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 BNIP3LO60238 219 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 CNTN5O94779 1100 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 LDOC1O95751 146 aaPredicted RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 EPHA8P29322 1005 aaPredicted RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 NOS2P35228 1153 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 VASPP50552 380 aaPredicted RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 CNTN1Q12860 1018 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 BNIP3Q12983 259 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 AGBL4Q5VU57 503 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 DSG4Q86SJ6 1040 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 SPATS2Q86XZ4 545 aaKnown RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 EID2Q8N6I1 236 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 HNRNPLLQ8WVV9 542 aaKnown RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 CNDP2Q96KP4 475 aaKnown RBP16.73■□□□□ 0.27
MBD3-206ENST00000589901 PIGVQ9NUD9 493 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 DKK4Q9UBT3 224 aa16.73■□□□□ 0.27
MBD3-206ENST00000589901 TPX2Q9ULW0 747 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms