RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ARHGAP36Q6ZRI8 547 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 NECAB2Q7Z6G3 386 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TRABD2AQ86V40 505 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 NLRP14Q86W24 1093 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ARHGAP12Q8IWW6 846 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MPP5Q8N3R9 675 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TMEM199Q8N511 208 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 LZTR1Q8N653 840 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 RTL3Q8N8U3 475 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MAFAQ8NHW3 353 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 DCAKDQ8WVC6 231 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ATXN2LQ8WWM7 1075 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MAML1Q92585 1016 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ZNF689Q96CS4 500 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SIGLEC10Q96LC7 697 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CEP295NLQ96MC4 621 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 AGAP3Q96P47 875 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CDK5RAP1Q96SZ6 601 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 VAT1Q99536 393 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 DHRS4Q9BTZ2 278 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 TTLL2Q9BWV7 592 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SLC39A8Q9C0K1 460 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 FAM107BQ9H098 131 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 GBA3Q9H227 469 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CCSER2Q9H7U1 834 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 CYP4F11Q9HBI6 524 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 PIH1D1Q9NWS0 290 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 NKIRAS1Q9NYS0 192 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 MPP6Q9NZW5 540 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 AFF4Q9UHB7 1163 aaKnown RBP8.97□□□□□ -0.97
SMAD4-206ENST00000588860 VANGL2Q9ULK5 521 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 ACTL7BQ9Y614 415 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 IKBKGQ9Y6K9 419 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 GBF1Q92538 1859 aa8.97□□□□□ -0.97
SMAD4-206ENST00000588860 GMNCA6NCL1 334 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ARHGAP42A6NI28 874 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 SDR42E2A6NKP2 422 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 WASH4PA8MWX3 477 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 NDUFAB1O14561 156 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 TLR5O60602 858 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 SPAG7O75391 227 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PIAS1O75925 651 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 IGLV3-27P01718 113 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 URODP06132 367 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 INHBAP08476 426 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 NFKB1P19838 968 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 CCNCP24863 283 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 MAGEA10P43363 369 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 IFNAR2P48551 515 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 CCT5P48643 541 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 SEC24CP53992 1094 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 MLLT6P55198 1093 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 DSG1Q02413 1049 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF33AQ06730 810 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PLD1Q13393 1074 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PRPSAP1Q14558 356 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 RASA2Q15283 850 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 KBTBD12Q3ZCT8 623 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 TEX44Q53QW1 395 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ARTNQ5T4W7 220 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 AFMIDQ63HM1 303 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 RAP1GAP2Q684P5 730 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 FOXR1Q6PIV2 292 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 UNC5AQ6ZN44 842 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 TAX1BP1Q86VP1 789 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 CHSY1Q86X52 802 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 CTAGE3PQ8IX95 158 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF683Q8IZ20 524 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PDZD8Q8NEN9 1154 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 GSDMBQ8TAX9 411 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF473Q8WTR7 871 aaKnown RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 DYDC1Q8WWB3 177 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 OVCA2Q8WZ82 227 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 BTN2A3PQ96KV6 586 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 C1orf74Q96LT6 269 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF512Q96ME7 567 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 TSGA13Q96PP4 275 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 SMC6Q96SB8 1091 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 YME1L1Q96TA2 773 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PRMT1Q99873 361 aaKnown RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 GORASP1Q9BQQ3 440 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 MLPHQ9BV36 600 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 ZYG11BQ9C0D3 744 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 NACA2Q9H009 215 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 RC3H2Q9HBD1 1191 aaKnown RBP8.96□□□□□ -0.98
SMAD4-206ENST00000588860 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 SENP1Q9P0U3 644 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 YIPF1Q9Y548 306 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 PCDHA11Q9Y5I1 949 aa8.96□□□□□ -0.98
SMAD4-206ENST00000588860 IQANK1A0A1B0GTG1 560 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 A0A1W2PPM1 405 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 ZBBXA8MT70 800 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PRRG1O14668 218 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 TRDMT1O14717 391 aaKnown RBP8.95□□□□□ -0.98
SMAD4-206ENST00000588860 PSMD3O43242 534 aa8.95□□□□□ -0.98
SMAD4-206ENST00000588860 CNTN5O94779 1100 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms