RNA–Protein interactions for RNA: ENST00000587321.1

RFX2-208, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 337 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-208	ENST00000587321	APCDD1	Q8J025	514 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	LMLN	Q96KR4	655 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	PEBP4	Q96S96	227 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	ACOX2	Q99424	681 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	SEMA4A	Q9H3S1	761 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	EBF1	Q9UH73	591 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	DNAI1	Q9UI46	699 aa		13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.65	□□□□□ -0.22
RFX2-208	ENST00000587321	EDDM13	A0A1B0GTR0	161 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	CBX4	O00257	560 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ARHGAP6	O43182	974 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ADAM23	O75077	832 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	RARA	P10276	462 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ACADM	P11310	421 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	HOXC13	P31276	330 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	SERPINB6	P35237	376 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	RECQL	P46063	649 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	HCAR3	P49019	387 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	FNTB	P49356	437 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	CLCN6	P51797	869 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	VAV2	P52735	878 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	CDH6	P55285	790 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	YBEY	P58557	167 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	SLC20A2	Q08357	652 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	SEMA3B	Q13214	749 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ENPP2	Q13822	863 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	PDK2	Q15119	407 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	PARP15	Q460N3	678 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ACCSL	Q4AC99	568 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	KCNT1	Q5JUK3	1230 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	RAD9B	Q6WBX8	426 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	CEP68	Q76N32	757 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	POLN	Q7Z5Q5	900 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	DSG4	Q86SJ6	1040 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	METTL3	Q86U44	580 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	NLRP14	Q86W24	1093 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ARFGAP1	Q8N6T3	406 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	ATP11C	Q8NB49	1132 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	KCTD6	Q8NC69	237 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	PDLIM2	Q96JY6	352 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	KCTD15	Q96SI1	283 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	INTS6	Q9UL03	887 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	RAD54B	Q9Y620	910 aa		13.64	□□□□□ -0.23
RFX2-208	ENST00000587321	CXorf51A	A0A1B0GTR3	108 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TARSL2	A2RTX5	802 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	WASH4P	A8MWX3	477 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	WASH3P	C4AMC7	463 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	ZNF217	O75362	1048 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	GOT1	P17174	413 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	PRKCH	P24723	683 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	PXN	P49023	591 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	NDST2	P52849	883 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	HADHB	P55084	474 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	SLC25A11	Q02978	314 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	CA9	Q16790	459 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	PTPRN	Q16849	979 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	DAB2IP	Q5VWQ8	1189 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TMCO3	Q6UWJ1	677 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TMEM92	Q6UXU6	159 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	RASSF3	Q86WH2	238 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	RHOT1	Q8IXI2	618 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	LZTR1	Q8N653	840 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	ACRBP	Q8NEB7	543 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	OR7D4	Q8NG98	312 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	OR2T3	Q8NH03	318 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	PRCC	Q92733	491 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TRIM44	Q96DX7	344 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	RPL10L	Q96L21	214 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	CALN1	Q9BXU9	219 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TSGA10	Q9BZW7	698 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	TMEM245	Q9H330	911 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	PRDM16	Q9HAZ2	1276 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	C2orf42	Q9NWW7	574 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	DDX56	Q9NY93	547 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	VPS51	Q9UID3	782 aa		13.63	□□□□□ -0.23
RFX2-208	ENST00000587321	DOCK4	Q8N1I0	1966 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	CACNA1I	Q9P0X4	2223 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	ARHGAP42	A6NI28	874 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	RPP40	O75818	363 aa	Known RBP	13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	DNTT	P04053	509 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	TDGF1	P13385	188 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	HLA-E	P13747	358 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	IL1R2	P27930	398 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	CTSO	P43234	321 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	VASP	P50552	380 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	TTC31	Q49AM3	519 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	HS1BP3	Q53T59	392 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	LRRC38	Q5VT99	294 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	ZNF776	Q68DI1	518 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	C11orf63	Q6NUN7	778 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	DAAM2	Q86T65	1068 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	SYCE1	Q8N0S2	351 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	UMODL1-AS1	Q8N2C9	162 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	ZBTB44	Q8NCP5	570 aa		13.62	□□□□□ -0.23
RFX2-208	ENST00000587321	MDGA1	Q8NFP4	955 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms