RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, human

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-208	ENST00000586539	ZHX1-C8orf76	Q96EF9	292 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	MRI	Q9BWK5	157 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	IDI2	Q9BXS1	227 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	TMEM161A	Q9NX61	479 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	TRIM3	O75382	744 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	KLRK1	P26718	216 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	MRPS22	P82650	360 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	PLA2G4E	Q3MJ16	856 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CCNJL	Q8IV13	435 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	C10orf107	Q8IVU9	208 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	ACER1	Q8TDN7	264 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	E2F7	Q96AV8	911 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CYP4F12	Q9HCS2	524 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	WDR6	Q9NNW5	1121 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	RDH8	Q9NYR8	311 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	VTI1B	Q9UEU0	232 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	MARCO	Q9UEW3	520 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	KCNE2	Q9Y6J6	123 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	PPP1R3G	B7ZBB8	358 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	OPLAH	O14841	1288 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	TFRC	P02786	760 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	NPEPPS	P55786	919 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	ARF3	P61204	181 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	ARF1	P84077	181 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	RASA2	Q15283	850 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	TAF5	Q15542	800 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CORO6	Q6QEF8	472 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	DDIAS	Q8IXT1	998 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	SLC30A5	Q8TAD4	765 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	BTN2A2	Q8WVV5	523 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	SOCS4	Q8WXH5	440 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CAVIN3	Q969G5	261 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CDCA5	Q96FF9	252 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	CLK4	Q9HAZ1	481 aa	Known RBP	11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	NMRK1	Q9NWW6	199 aa		11.42	□□□□□ -0.58
ABCA8-208	ENST00000586539	FAM172BP	A6NC97	362 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	TFEC	O14948	347 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	ADSS	P30520	456 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	HK2	P52789	917 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	HERC3	Q15034	1050 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	PRAMEF18	Q5VWM3	479 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	CHSY1	Q86X52	802 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	WDR49	Q8IV35	697 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	GPC2	Q8N158	579 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	TBC1D15	Q8TC07	691 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	GTPBP2	Q9BX10	602 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	ABCG8	Q9H221	673 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	RAB6B	Q9NRW1	208 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	MED11	Q9P086	117 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	GLS2	Q9UI32	602 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	UNC5C	O95185	931 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	LSM8	O95777	96 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	ITGB3	P05106	788 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	ATP5B	P06576	529 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	POLB	P06746	335 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	HOXA10	P31260	410 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	RORA	P35398	523 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	ETFB	P38117	255 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	THPO	P40225	353 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	LHX1	P48742	406 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	GALNT3	Q14435	633 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	C15orf52	Q6ZUT6	534 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	LRRC8D	Q7L1W4	858 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	NET1	Q7Z628	596 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	TTC7B	Q86TV6	843 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	RBBP8	Q99708	897 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	MTG1	Q9BT17	334 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	SENP2	Q9HC62	589 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	KLHL11	Q9NVR0	708 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	KANSL3	Q9P2N6	904 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	OGDHL	Q9ULD0	1010 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	POLR3H	Q9Y535	204 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	SLC37A4	O43826	429 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	KDM4B	O94953	1096 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	CD79B	P40259	229 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	CCNF	P41002	786 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	RAB2A	P61019	212 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	PDK2	Q15119	407 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	HAGHL	Q6PII5	290 aa	Predicted RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	C4orf33	Q8N1A6	199 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	MPP5	Q8N3R9	675 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	SPERT	Q8NA61	448 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	CLP1	Q92989	425 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	TMEM168	Q9H0V1	697 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	AGO4	Q9HCK5	861 aa	Known RBP	11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	BRD7	Q9NPI1	651 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	NAGPA	Q9UK23	515 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539		H0YJX3	145 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	PLSCR1	O15162	318 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	SASH3	O75995	380 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	OXCT1	P55809	520 aa		11.41	□□□□□ -0.58
ABCA8-208	ENST00000586539	IL5RA	Q01344	420 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms