RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 CPXM2Q8N436 756 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 TFB1MQ8WVM0 346 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 RTP4Q96DX8 246 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 DDX50Q9BQ39 737 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 EBF3Q9H4W6 596 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 ETNK2Q9NVF9 386 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 PPARGC1AQ9UBK2 798 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 SNX10Q9Y5X0 201 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 COL6A3P12111 3177 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 TRDMT1O14717 391 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 STK10O94804 968 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 IFNB1P01574 187 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 ARSAP15289 507 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 SLC6A4P31645 630 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 GGCXP38435 758 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 TDGQ13569 410 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 FAM133BQ5BKY9 247 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 MTERF4Q7Z6M4 381 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 PCGF5Q86SE9 256 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 CHSY1Q86X52 802 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 FAM217AQ8IXS0 508 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 IRF7Q92985 503 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 FMO2Q99518 471 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 TSPYL1Q9H0U9 437 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 GRHL1Q9NZI5 618 aa18.3■□□□□ 0.52
RBFOX1-222ENST00000585867 WASH4PA8MWX3 477 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 TSPAN3O60637 253 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 SEC31AO94979 1220 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 TACR2P21452 398 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 ECHS1P30084 290 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 TNK2Q07912 1038 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 TRIP13Q15645 432 aaPredicted RBP18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 HEATR6Q6AI08 1181 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 RFWD3Q6PCD5 774 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 TPGS1Q6ZTW0 290 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 HDXQ7Z353 690 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 RNF135Q8IUD6 432 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 GJD3Q8N144 294 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 FAM71DQ8N9W8 422 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 ART4Q93070 314 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 ATP2A3Q93084 1043 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 PRMT1Q99873 361 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 RETREG1Q9H6L5 497 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 SPHK2Q9NRA0 654 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 PAK5Q9P286 719 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 MYO10Q9HD67 2058 aa18.29■□□□□ 0.52
RBFOX1-222ENST00000585867 KIF26AQ9ULI4 1882 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 F5H5T6 163 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 SMAPO00193 183 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 KCNN4O15554 427 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 NFATC1O95644 943 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 PLTPP55058 493 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 SLC10A2Q12908 348 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 RUNX3Q13761 415 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 AUHQ13825 339 aaKnown RBP18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 DHCR24Q15392 516 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 TRADDQ15628 312 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 P3H1Q32P28 736 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 LY6G5CQ5SRR4 150 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 RHBDF2Q6PJF5 856 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 CEP128Q6ZU80 1094 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 C14orf80Q86SX3 495 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 TMEM25Q86YD3 366 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 LGI2Q8N0V4 545 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 TMA16Q96EY4 203 aaKnown RBP18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 ZYG11BQ9C0D3 744 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 HPS4Q9NQG7 708 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 ZDHHC18Q9NUE0 388 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 GTSE1Q9NYZ3 720 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 VANGL2Q9ULK5 521 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 NEU3Q9UQ49 428 aa18.28■□□□□ 0.52
RBFOX1-222ENST00000585867 IGLV3-10A0A075B6K4 115 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 ARNTLO00327 626 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 DNALI1O14645 258 aaPredicted RBP18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 MTSS1O43312 755 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 NARSO43776 548 aaKnown RBP18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 RHOQP17081 205 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 IVDP26440 423 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 RBL1P28749 1068 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 VPS41P49754 854 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 ZNF33AQ06730 810 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 GALNT2Q10471 571 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 GPS1Q13098 491 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 PRKD1Q15139 912 aaPredicted RBP18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 MPPE1Q53F39 396 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 RTL3Q8N8U3 475 aaKnown RBP18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 TTC8Q8TAM2 541 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 CSGALNACT1Q8TDX6 532 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 MYEOVQ96EZ4 313 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 NECAB3Q96P71 396 aaPredicted RBP18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 FOXP3Q9BZS1 431 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 ECT2Q9H8V3 914 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 USP29Q9HBJ7 922 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 CD320Q9NPF0 282 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 ANAPC5Q9UJX4 755 aa18.27■□□□□ 0.52
RBFOX1-222ENST00000585867 SORCS3Q9UPU3 1222 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms