RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DIAPH2O60879 1101 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 TBL1XO60907 577 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 ATP5BP06576 529 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 EPHX1P07099 455 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 ACADMP11310 421 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 SLC9A1P19634 815 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 CD6P30203 668 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 DCTP40126 519 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 USP8P40818 1118 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 SUZ12Q15022 739 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 WDR45BQ5MNZ6 344 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 PIK3R6Q5UE93 754 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 TMEM215Q68D42 235 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 DENND1BQ6P3S1 775 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 CHST9Q7L1S5 443 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 TMPRSS6Q8IU80 811 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 CCDC117Q8IWD4 279 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 HJURPQ8NCD3 748 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 MKRN2Q9H000 416 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 SLC6A17Q9H1V8 727 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 CLSTN2Q9H4D0 955 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 THAP9Q9H5L6 903 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 POPDC2Q9HBU9 364 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 ITM2CQ9NQX7 267 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 USP36Q9P275 1121 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 PCDHB1Q9Y5F3 818 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 PLXNA2O75051 1894 aa11.52□□□□□ -0.57
CCDC47-206ENST00000584112 ZFC3H1O60293 1989 aaKnown RBP11.52□□□□□ -0.57
CCDC47-206ENST00000584112 DOCK9Q9BZ29 2069 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 E5RJQ4 531 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 ENC1O14682 589 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 APOEP02649 317 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 MPOP05164 745 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 FYNP06241 537 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 DLDP09622 509 aaKnown RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 RNF224P0DH78 156 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 POLR2EP19388 210 aaKnown RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 GLDCP23378 1020 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 PRKCHP24723 683 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 PON1P27169 355 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 COPAP53621 1224 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 SNX16P57768 344 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 PDCLQ13371 301 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 CAMK2GQ13555 558 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 MAN2A1Q16706 1144 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 MBLAC2Q68D91 279 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 RFWD3Q6PCD5 774 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 IRF2BP1Q8IU81 584 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 CADM4Q8NFZ8 388 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 OR2T3Q8NH03 318 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 SHC3Q92529 594 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 TOE1Q96GM8 510 aaKnown RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 FCRL2Q96LA5 508 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 ZNF578Q96N58 590 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 NOX5Q96PH1 765 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 WSB2Q9NYS7 404 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 SLCO1B1Q9Y6L6 691 aa11.51□□□□□ -0.57
CCDC47-206ENST00000584112 RP1L1Q8IWN7 2480 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-206ENST00000584112 GOLGA6L7A0A1B0GV03 622 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 BECN2A8MW95 431 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 MEI4A8MW99 385 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-206ENST00000584112 IGLV3-19P01714 112 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 ASLP04424 464 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 GLI1P08151 1106 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 ERCC5P28715 1186 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-206ENST00000584112 SLC6A4P31645 630 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 CD70P32970 193 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 TPMTP51580 245 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 SGSHP51688 502 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 YWHAZP63104 245 aaKnown RBP11.5□□□□□ -0.57
CCDC47-206ENST00000584112 PTK2Q05397 1052 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 CDH18Q13634 790 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 NADSYN1Q6IA69 706 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 IL27RAQ6UWB1 636 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 KDM7AQ6ZMT4 941 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 CCDC81Q6ZN84 652 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 TAC4Q86UU9 113 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 ADIPOR2Q86V24 386 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 ATP6V0D2Q8N8Y2 350 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 FIBINQ8TAL6 211 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 CYB5D2Q8WUJ1 264 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 SLC39A13Q96H72 371 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
CCDC47-206ENST00000584112 BTN2A3PQ96KV6 586 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms