RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 C16orf46Q6P387 395 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MPZL3Q6UWV2 235 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CCNJLQ8IV13 435 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RIBC1Q8N443 379 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAF2Q96CS3 445 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RILPQ96NA2 401 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 BTBD10Q9BSF8 475 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RPF1Q9H9Y2 349 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.518e-10■■■□□ 15.9
CDK5RAP3-231ENST00000584063 HECAQ9UBI9 543 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 APRTP07741 180 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GNAT1P11488 350 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PHBP35232 272 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PGM1P36871 562 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GRIA1P42261 906 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NUBP1P53384 320 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TMPRSS15P98073 1019 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 UBAP2LQ14157 1087 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 DPYSL3Q14195 570 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC45A4Q5BKX6 768 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MARCH8Q5T0T0 291 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAM102AQ5T9C2 384 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NXPE3Q969Y0 559 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NSL1Q96IY1 281 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 EBF4Q9BQW3 602 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PCMTD2Q9NV79 361 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SHOC2Q9UQ13 582 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LRRC42Q9Y546 428 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TREHO43280 583 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GAS2O43903 313 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 LYPLA1O75608 230 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZWINTO95229 277 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NPPAP01160 153 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TNNC2P02585 160 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ITGAVP06756 1048 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 STAG3L1P0CL83 205 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SMIM10L2AP0DMW4 78 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SMIM10L2BP0DMW5 78 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CYP2C9P11712 490 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 RGS2P41220 211 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRIM32Q13049 653 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CA9Q16790 459 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GLRA4Q5JXX5 417 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MORN1Q5T089 497 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRMT10BQ6PF06 316 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GATAD2AQ86YP4 633 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 STMN2Q93045 179 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 HEXIM2Q96MH2 286 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CEP41Q9BYV8 373 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CORO1CQ9ULV4 474 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 GABRQQ9UN88 632 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PDLIM1O00151 329 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 KCNN4O15554 427 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CCDC22O60826 627 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 IDUAP35475 653 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FLT3LGP49771 235 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 AP1B1Q10567 949 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 PIGHQ14442 188 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CCDC142Q17RM4 750 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 EML3Q32P44 896 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 POLNQ7Z5Q5 900 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MPP5Q8N3R9 675 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NKAIN3Q8N8D7 197 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZNF540Q8NDQ6 660 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CFAP61Q8NHU2 1237 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 NKD2Q969F2 451 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 CCDC124Q96CT7 223 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 MOCOSQ96EN8 888 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 B3GNT5Q9BYG0 378 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 FZD8Q9H461 694 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SERHL2Q9H4I8 314 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC24A2Q9UI40 661 aa11.86□□□□□ -0.51
CDK5RAP3-231ENST00000584063 TRIM43BA6NCK2 446 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 A6NHS1 94 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 COPEO14579 308 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ZMPSTE24O75844 475 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 ATP5HO75947 161 aa11.85□□□□□ -0.51
CDK5RAP3-231ENST00000584063 SLC10A3P09131 477 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms