RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 GUSBP11Q6P575 273 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 RFWD3Q6PCD5 774 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 NELFCDQ8IXH7 590 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 SPATA20Q8TB22 786 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 PTPRN2Q92932 1015 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 TMEM74Q96NL1 305 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 EPN3Q9H201 632 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 CUEDC2Q9H467 287 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
CASC3-208ENST00000583649 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 MYO9AB2RTY4 2548 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 MUSKO15146 869 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 AQP9O43315 295 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 NEBLO76041 1014 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 LUC7L3O95232 432 aaKnown RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 VNN1O95497 513 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 GIMD1P0DJR0 217 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 GJB2P29033 226 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 NOS2P35228 1153 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 KNOP1Q1ED39 458 aaKnown RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 Q6ZSR6 202 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 EPM2AIP1Q7L775 607 aaPredicted RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 PTAR1Q7Z6K3 402 aaPredicted RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 PARGQ86W56 976 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 PTRH1Q86Y79 214 aaKnown RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 ANKRD52Q8NB46 1076 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 ZNF548Q8NEK5 533 aaPredicted RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 OR13H1Q8NG92 308 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 SCG3Q8WXD2 468 aaKnown RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 FAM131CQ96AQ9 280 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 MYOCQ99972 504 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 PANK2Q9BZ23 570 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 ULBP1Q9BZM6 244 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 EPB41L5Q9HCM4 733 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 AKAP7Q9P0M2 348 aaPredicted RBP11.47□□□□□ -0.57
CASC3-208ENST00000583649 SPASTQ9UBP0 616 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 FRMD4BQ9Y2L6 1034 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 HS3ST3A1Q9Y663 406 aa11.47□□□□□ -0.57
CASC3-208ENST00000583649 A0A1W2PNU3 283 aaPredicted RBP11.46□□□□□ -0.57
CASC3-208ENST00000583649 A0A1W2PQU0 124 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CLEC18AA5D8T8 446 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 PCDH8O95206 1070 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CSF2P04141 144 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 NME1P15531 152 aaKnown RBP11.46□□□□□ -0.57
CASC3-208ENST00000583649 PRLRP16471 622 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 HOXD13P35453 343 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 UGT1A5P35504 534 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 RABIFP47224 123 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 SGSHP51688 502 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 TBX4P57082 545 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CNTN1Q12860 1018 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 KCNAB2Q13303 367 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 AGBL4Q5VU57 503 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CLEC18BQ6UXF7 455 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 SV2AQ7L0J3 742 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 ZSCAN30Q86W11 494 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 HORMAD1Q86X24 394 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CLEC18CQ8NCF0 446 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 KCTD13Q8WZ19 329 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 EDEM1Q92611 657 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
CASC3-208ENST00000583649 CATSPER2Q96P56 530 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 TWNKQ96RR1 684 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CCDC3Q9BQI4 270 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 SMC3Q9UQE7 1217 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 CA5BQ9Y2D0 317 aa11.46□□□□□ -0.57
CASC3-208ENST00000583649 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 M0QYT0 321 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 XPO1O14980 1071 aaKnown RBP11.45□□□□□ -0.58
CASC3-208ENST00000583649 HLA-DRAP01903 254 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ANXA6P08133 673 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 JUNDP17535 347 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 PTK2BQ14289 1009 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 IGFBP7Q16270 282 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 SKIDA1Q1XH10 827 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ZNF394Q53GI3 561 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ZNF542PQ5EBM4 170 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 SPOPLQ6IQ16 392 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 CRTC1Q6UUV9 634 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ABI3BPQ7Z7G0 1075 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 OR6C4Q8NGE1 309 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 LMX1AQ8TE12 382 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 ERCC4Q92889 916 aaPredicted RBP11.45□□□□□ -0.58
CASC3-208ENST00000583649 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 LMLNQ96KR4 655 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 GFM1Q96RP9 751 aaKnown RBP11.45□□□□□ -0.58
CASC3-208ENST00000583649 CMKLR1Q99788 373 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 BACH2Q9BYV9 841 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 CNGB3Q9NQW8 809 aa11.45□□□□□ -0.58
CASC3-208ENST00000583649 PLEKHB1Q9UF11 243 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms