RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PTPRZ1P23471 2315 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 EP300Q09472 2414 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 CREB3O43889 395 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 SIN3BO75182 1162 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 NDUFS2O75306 463 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 LRIG2O94898 1065 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 DNTTP04053 509 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 AIF1P55008 147 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 CCDC6Q16204 474 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 ARTNQ5T4W7 220 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 MANEALQ5VSG8 457 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 CNGA4Q8IV77 575 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 PYROXD2Q8N2H3 581 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 DEFB119Q8N690 84 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 GPR161Q8N6U8 529 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 OR7D4Q8NG98 312 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 FNIP1Q8TF40 1166 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 EPAS1Q99814 870 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 SPON2Q9BUD6 331 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 C2orf49Q9BVC5 232 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 PARD6AQ9NPB6 346 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 GPATCH2LQ9NWQ4 482 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 FZD10Q9ULW2 581 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 SDK1Q7Z5N4 2213 aa12.93□□□□□ -0.34
SMARCE1-218ENST00000582955 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ILVBLA1L0T0 632 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 TARSL2A2RTX5 802 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 AKR1B10O60218 316 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 PRPSAP2O60256 369 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 SNAP91O60641 907 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 RNASEH1O60930 286 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 LRP3O75074 770 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 RHOQP17081 205 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 EPHB2P29323 1055 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 CD6P30203 668 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 L1CAMP32004 1257 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 MPLP40238 635 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 MAPKAPK2P49137 400 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 TPMTP51580 245 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 GALCP54803 685 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 RPS14P62263 151 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ARID5BQ14865 1188 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 SLC18A3Q16572 532 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 CYP2U1Q7Z449 544 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM124AQ86V42 546 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 DCAF4L2Q8NA75 395 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ARHGEF26Q96DR7 871 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 TOE1Q96GM8 510 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 PSMB7Q99436 277 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 NUP85Q9BW27 656 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ATP13A1Q9HD20 1204 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ITM2CQ9NQX7 267 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 USP36Q9P275 1121 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 DNAI1Q9UI46 699 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 VPS51Q9UID3 782 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 AP4E1Q9UPM8 1137 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 PCDHGA5Q9Y5G8 931 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 FRYLO94915 3013 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 ABCA7Q8IZY2 2146 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
SMARCE1-218ENST00000582955 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 DOCK4Q8N1I0 1966 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 CBX4O00257 560 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 BNIP3LO60238 219 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 CYP1A2P05177 515 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 VAV1P15498 845 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 GLDCP23378 1020 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 MIPP30301 263 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 OXTRP30559 389 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 PTGER3P43115 390 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 GNA12Q03113 381 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 LYSMD4Q5XG99 296 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 LINGO4Q6UY18 593 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF783Q6ZMS7 281 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 NLRP14Q86W24 1093 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 ZNF354CQ86Y25 554 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 MMAAQ8IVH4 418 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 STK40Q8N2I9 435 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 ARFGAP1Q8N6T3 406 aa12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-218ENST00000582955 ATP11CQ8NB49 1132 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms