RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CARNMT1Q8N4J0 409 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 ARHGEF2Q92974 986 aaKnown RBP12.3□□□□□ -0.44
CCDC57-216ENST00000582885 RTP4Q96DX8 246 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 P2RY11Q96G91 374 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 CELF6Q96J87 481 aaKnown RBP12.3□□□□□ -0.44
CCDC57-216ENST00000582885 FAM118BQ9BPY3 351 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 BBS2Q9BXC9 721 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 PLA2G2FQ9BZM2 168 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 USP29Q9HBJ7 922 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 KIAA1522Q9P206 1035 aaPredicted RBP12.3□□□□□ -0.44
CCDC57-216ENST00000582885 AMACRQ9UHK6 382 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 FBXO10Q9UK96 956 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
CCDC57-216ENST00000582885 CACNG3O60359 315 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 MAFKO60675 156 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ECEL1O95672 775 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 TYRP14679 529 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 IL10RBQ08334 325 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 NR1H3Q13133 447 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 CDH18Q13634 790 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 HEATR6Q6AI08 1181 aaKnown RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 C4orf22Q6V702 233 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 KIAA0907Q7Z7F0 614 aaPredicted RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 CPA6Q8N4T0 437 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 CCNYQ8ND76 341 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 HTR3CQ8WXA8 447 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 RSAD2Q8WXG1 361 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ALG14Q96F25 216 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ASIC4Q96FT7 647 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 VAT1Q99536 393 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 LGMNQ99538 433 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 TMEM121Q9BTD3 319 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 TRMT61BQ9BVS5 477 aaKnown RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 ACE2Q9BYF1 805 aaPredicted RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 HPS4Q9NQG7 708 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 IGSF9Q9P2J2 1179 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 IPO11Q9UI26 975 aaKnown RBP12.29□□□□□ -0.44
CCDC57-216ENST00000582885 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 NUMBLQ9Y6R0 609 aa12.29□□□□□ -0.44
CCDC57-216ENST00000582885 C5orf60A6NFR6 353 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 C2CD4DB7Z1M9 353 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 NEDD8-MDP1E9PL57 170 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 SGK1O00141 431 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 DFFAO00273 331 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 MATN3O15232 486 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 RAD51CO43502 376 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 KDELR3O43731 214 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 GCATO75600 419 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 MAP3K6O95382 1288 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 ADH5P11766 374 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 RBL1P28749 1068 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 IFI35P80217 286 aaPredicted RBP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 TNK2Q07912 1038 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 AP1B1Q10567 949 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 RUNX3Q13761 415 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 PTK6Q13882 451 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 DMC1Q14565 340 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 ANO4Q32M45 955 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 P3H1Q32P28 736 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 FSCBQ5H9T9 825 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 RNF219Q5W0B1 726 aaPredicted RBP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 JAMLQ86YT9 394 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 CCHCR1Q8TD31 782 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 UBXN4Q92575 508 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 MAML1Q92585 1016 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
CCDC57-216ENST00000582885 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 EBF3Q9H4W6 596 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 TRPV5Q9NQA5 729 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 HPCAL4Q9UM19 191 aa12.28□□□□□ -0.44
CCDC57-216ENST00000582885 A0A0D9SEW6 157 aa12.27□□□□□ -0.45
CCDC57-216ENST00000582885 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
CCDC57-216ENST00000582885 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
CCDC57-216ENST00000582885 ARNTLO00327 626 aa12.27□□□□□ -0.45
CCDC57-216ENST00000582885 KCNN4O15554 427 aa12.27□□□□□ -0.45
CCDC57-216ENST00000582885 TTI1O43156 1089 aa12.27□□□□□ -0.45
CCDC57-216ENST00000582885 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
CCDC57-216ENST00000582885 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.45
CCDC57-216ENST00000582885 ARSAP15289 507 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms