RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 LEFTY2O00292 366 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 PRB1P04280 392 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
SNX11-210ENST00000582104 CCR1P32246 355 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 COG7P83436 770 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 ZNF211Q13398 564 aaPredicted RBP13.68□□□□□ -0.22
SNX11-210ENST00000582104 RPS6KA1Q15418 735 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 HADHQ16836 314 aaKnown RBP13.68□□□□□ -0.22
SNX11-210ENST00000582104 TMEM196Q5HYL7 178 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 BRMS1LQ5PSV4 323 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 ERMARDQ5T6L9 678 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 SND1Q7KZF4 910 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNX11-210ENST00000582104 CYP2U1Q7Z449 544 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 POLNQ7Z5Q5 900 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 RAB44Q7Z6P3 723 aaPredicted RBP13.68□□□□□ -0.22
SNX11-210ENST00000582104 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 TTC16Q8NEE8 873 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 PLD4Q96BZ4 506 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 NAPGQ99747 312 aaPredicted RBP13.68□□□□□ -0.22
SNX11-210ENST00000582104 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNX11-210ENST00000582104 AP4E1Q9UPM8 1137 aa13.68□□□□□ -0.22
SNX11-210ENST00000582104 ZNF462Q96JM2 2506 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 PI4KAP42356 2102 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 CFAP46Q8IYW2 2715 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 MYOFQ9NZM1 2061 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 PLXNB3Q9ULL4 1909 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 CCDC66A2RUB6 948 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 MIF4GDA9UHW6 222 aaKnown RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 SRGAP2O75044 1071 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 RNF40O75150 1001 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 APOEP02649 317 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 KRT1P04264 644 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 PYGMP11217 842 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 DESP17661 470 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 L1CAMP32004 1257 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 CXCR5P32302 372 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 AVPR1AP37288 418 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 AMPD2Q01433 879 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 USP4Q13107 963 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 SEMA3BQ13214 749 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 LLGL1Q15334 1064 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 ZNF77Q15935 545 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 BOLA3Q53S33 107 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 Q6ZNB5 142 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 DENND1CQ8IV53 801 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 KATNAL2Q8IYT4 538 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 FAM71BQ8TC56 605 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 HERPUD2Q9BSE4 406 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 DHX35Q9H5Z1 703 aaKnown RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 CCDC86Q9H6F5 360 aaKnown RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNX11-210ENST00000582104 TDP1Q9NUW8 608 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
SNX11-210ENST00000582104 HS3ST4Q9Y661 456 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 KIAA1549LQ6ZVL6 1849 aa13.67□□□□□ -0.22
SNX11-210ENST00000582104 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
SNX11-210ENST00000582104 LRRD1A4D1F6 860 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 KCNK3O14649 394 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 TRDMT1O14717 391 aaKnown RBP13.66□□□□□ -0.22
SNX11-210ENST00000582104 ACSL4O60488 711 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 KRT7P08729 469 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 KDELR1P24390 212 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 IL4RP24394 825 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 WEE1P30291 646 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 CASQ1P31415 396 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 SLC6A4P31645 630 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 MAPK8P45983 427 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 IRAK1P51617 712 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 RWDD2BP57060 319 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 FAM193AP78312 1265 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNX11-210ENST00000582104 DPYSL2Q16555 572 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 ITPRIPL2Q3MIP1 535 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
SNX11-210ENST00000582104 MS4A13Q5J8X5 152 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 EFHC2Q5JST6 749 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
SNX11-210ENST00000582104 RAP1GAP2Q684P5 730 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 NUGGCQ68CJ6 796 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 ATP6V0D2Q8N8Y2 350 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 TSC1Q92574 1164 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
SNX11-210ENST00000582104 SIK2Q9H0K1 926 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms