RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 STK33Q9BYT3 514 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 NEUROG2Q9H2A3 272 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 PDCL3Q9H2J4 239 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 PIGVQ9NUD9 493 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 PCOLCE2Q9UKZ9 415 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 VANGL2Q9ULK5 521 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 ANKRD6Q9Y2G4 727 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 FNDC3AQ9Y2H6 1198 aaKnown RBP21.53■■□□□ 1.04
CCDC42-203ENST00000581598 TBC1D30Q9Y2I9 924 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 MSRB2Q9Y3D2 182 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 PLXNA2O75051 1894 aa21.53■■□□□ 1.04
CCDC42-203ENST00000581598 A0A1W2PPC4 97 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 GOLGA6L3A6NEY3 463 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 LRRC72A6NJI9 287 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 C1QTNF9BB2RNN3 333 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 HYAL3O43820 417 aaPredicted RBP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 C1QTNF9P0C862 333 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 ATP1A3P13637 1013 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 GOT1P17174 413 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 STK19P49842 368 aaPredicted RBP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 CDH4P55283 916 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 CENPCQ03188 943 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 KIF19Q2TAC6 998 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 SND1Q7KZF4 910 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 RAB44Q7Z6P3 723 aaPredicted RBP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 XYLT1Q86Y38 959 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 STK40Q8N2I9 435 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 FAM131CQ96AQ9 280 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 SPAG5Q96R06 1193 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 OMDQ99983 421 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 FEM1AQ9BSK4 669 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 WDCPQ9H6R7 721 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 LIMA1Q9UHB6 759 aaKnown RBP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 OR51B4Q9Y5P0 310 aa21.52■■□□□ 1.04
CCDC42-203ENST00000581598 TP53BP1Q12888 1972 aaPredicted RBP21.52■■□□□ 1.04
CCDC42-203ENST00000581598 ASPMQ8IZT6 3477 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 F8VZ95 297 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 PES1O00541 588 aaKnown RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 FLRT2O43155 660 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ATP9BO43861 1147 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 CCR5P51681 352 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 RACK1P63244 317 aaKnown RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ZNF177Q13360 481 aaPredicted RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 SLC25A52Q3SY17 297 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 NCEH1Q6PIU2 408 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ARCQ7LC44 396 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 APTXQ7Z2E3 356 aaKnown RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ERICH1Q86X53 443 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 AADATQ8N5Z0 425 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 MSANTD4Q8NCY6 345 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 BAHD1Q8TBE0 780 aaPredicted RBP21.51■■□□□ 1.03
CCDC42-203ENST00000581598 ADAMTS14Q8WXS8 1223 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 C1orf74Q96LT6 269 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 SNX11Q9Y5W9 270 aa21.51■■□□□ 1.03
CCDC42-203ENST00000581598 DOCK4Q8N1I0 1966 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 LRRC10BA6NIK2 292 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 RNASEH2AO75792 299 aaKnown RBP21.5■■□□□ 1.03
CCDC42-203ENST00000581598 ADCY5O95622 1261 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 FTH1P19P0C7X4 201 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 PSMD8P48556 350 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 SULT1E1P49888 294 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 IRAK1P51617 712 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 SUZ12Q15022 739 aaKnown RBP21.5■■□□□ 1.03
CCDC42-203ENST00000581598 BNIPLQ7Z465 357 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 C14orf80Q86SX3 495 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 NOP9Q86U38 636 aaKnown RBP21.5■■□□□ 1.03
CCDC42-203ENST00000581598 ZNF677Q86XU0 584 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 ZNF683Q8IZ20 524 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 OR52K2Q8NGK3 314 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 EPS8L1Q8TE68 723 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 TKTL2Q9H0I9 626 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 SLC25A13Q9UJS0 675 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 DAAM1Q9Y4D1 1078 aa21.5■■□□□ 1.03
CCDC42-203ENST00000581598 DRGXA6NNA5 263 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 VILLO15195 856 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 ALOX15BO15296 676 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 SLC7A4O43246 635 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 PCDHGA12O60330 932 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 DFNA5O60443 496 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 TFE3P19532 575 aaPredicted RBP21.49■■□□□ 1.03
CCDC42-203ENST00000581598 CTSKP43235 329 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 ADPRHP54922 357 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 NOMO3P69849 1222 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 KRT31Q15323 416 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 FAM102AQ5T9C2 384 aaPredicted RBP21.49■■□□□ 1.03
CCDC42-203ENST00000581598 SARM1Q6SZW1 724 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 DSG4Q86SJ6 1040 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 SIK2Q9H0K1 926 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 GANQ9H2C0 597 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 KDM4CQ9H3R0 1056 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 GRPEL1Q9HAV7 217 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 ANLNQ9NQW6 1124 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 TAB2Q9NYJ8 693 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 VPS28Q9UK41 221 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 KLK13Q9UKR3 277 aa21.49■■□□□ 1.03
CCDC42-203ENST00000581598 APOBEC2Q9Y235 224 aaKnown RBP21.49■■□□□ 1.03
CCDC42-203ENST00000581598 FAM47DPA6NHR8 397 aa21.48■■□□□ 1.03
CCDC42-203ENST00000581598 I6L893 689 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms