RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
NF1-220ENST00000581113 FEM1BQ9UK73 627 aa4.88□□□□□ -1.63
NF1-220ENST00000581113 UTS2RQ9UKP6 389 aa4.88□□□□□ -1.63
NF1-220ENST00000581113 TNFSF13BQ9Y275 285 aa4.88□□□□□ -1.63
NF1-220ENST00000581113 UACAQ9BZF9 1416 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 UHRF1BP1LA0JNW5 1464 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 COL3A1P02461 1466 aaPredicted RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 ABCC2Q92887 1545 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 UGGT2Q9NYU1 1516 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 DIP2BQ9P265 1576 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 KIF13AQ9H1H9 1805 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 TK1P04183 234 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 LYL1P12980 280 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 ACP5P13686 325 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 MCM2P49736 904 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 ACTR2P61160 394 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 ALKBH1Q13686 389 aaKnown RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 RBMS2Q15434 407 aaKnown RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 ZRSR2Q15696 482 aaKnown RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 KIAA1755Q5JYT7 1200 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 RASGRP2Q7LDG7 609 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 KLBQ86Z14 1044 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.87□□□□□ -1.63
NF1-220ENST00000581113 VPS52Q8N1B4 723 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 TMEM57Q8N5G2 664 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 C16orf52Q8NHV5 167 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 SPPL3Q8TCT6 385 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 PIGOQ8TEQ8 1089 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 WIPF2Q8TF74 440 aaPredicted RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 KTI12Q96EK9 354 aaPredicted RBP4.87□□□□□ -1.63
NF1-220ENST00000581113 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.87□□□□□ -1.63
NF1-220ENST00000581113 PKP3Q9Y446 797 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 ZMYM2Q9UBW7 1377 aa4.87□□□□□ -1.63
NF1-220ENST00000581113 PPEF2O14830 753 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 SH3BP5O60239 455 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 PPM1FP49593 454 aaPredicted RBP4.86□□□□□ -1.63
NF1-220ENST00000581113 PLCD1P51178 756 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 PPFIA1Q13136 1202 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 MIDNQ504T8 468 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 ZNF484Q5JVG2 852 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 SLC30A9Q6PML9 568 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 DDIASQ8IXT1 998 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 CNPY4Q8N129 248 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 CEP70Q8NHQ1 597 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 KAT2AQ92830 837 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 SDCCAG3Q96C92 435 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 RBM17Q96I25 401 aaKnown RBP4.86□□□□□ -1.63
NF1-220ENST00000581113 ELOVL5Q9NYP7 299 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 LAMP3Q9UQV4 416 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 GPR52Q9Y2T5 361 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 DERAQ9Y315 318 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 PLB1Q6P1J6 1458 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 PRXQ9BXM0 1461 aa4.86□□□□□ -1.63
NF1-220ENST00000581113 ZNF335Q9H4Z2 1342 aaPredicted RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 NPIPB13A6NJU9 1138 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 NPIPB4C9JG80 1138 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 STX16-NPEPL1H3BU86 382 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 RHODO00212 210 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 STX16O14662 325 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 PRPF4O43172 522 aaKnown RBP eCLIP4.85□□□□□ -1.63
NF1-220ENST00000581113 CNOT3O75175 753 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 CSF1P09603 554 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 PKMP14618 531 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 HOXB9P17482 250 aaPredicted RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 GSTM2P28161 218 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 PNPLA4P41247 253 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 OAZ1P54368 228 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 MTX1Q13505 466 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 GXYLT1Q4G148 440 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 RUNDC3AQ59EK9 446 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 MTFR2Q6P444 385 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 B4GALNT4Q76KP1 1039 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 RNF144BQ7Z419 303 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 LINS1Q8NG48 757 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 FAM110DQ8TAY7 271 aaPredicted RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 SMG7Q92540 1137 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 HERC2P3Q9BVR0 1158 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 ACAD9Q9H845 621 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 HEY2Q9UBP5 337 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 DTX4Q9Y2E6 619 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 AFG3L2Q9Y4W6 797 aa4.85□□□□□ -1.63
NF1-220ENST00000581113 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.85□□□□□ -1.63
NF1-220ENST00000581113 KIAA0556O60303 1618 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 KDM5BQ9UGL1 1544 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 GOLGA3Q08378 1498 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 ZNF521Q96K83 1311 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 TRBV5-3A0A0A0MS03 114 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 TCRBV7S3A2A0A539 114 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 SYN3O14994 580 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 WNT1P04628 370 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 PRF1P14222 555 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 PTMSP20962 102 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 CHRNA5P30532 468 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 DLGAP5Q15398 846 aa4.84□□□□□ -1.63
NF1-220ENST00000581113 ISM2Q6H9L7 571 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms