RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-215	ENST00000580879	ACADM	P11310	421 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	DES	P17661	470 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	GLDC	P23378	1020 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	MPL	P40238	635 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	TPMT	P51580	245 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	RPS14	P62263	151 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	NRG1	Q02297	640 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SULT2A1	Q06520	285 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SCAP	Q12770	1279 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	C6orf118	Q5T5N4	469 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	C9orf64	Q5T6V5	341 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	DAB2IP	Q5VWQ8	1189 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	ALKBH5	Q6P6C2	394 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SARM1	Q6SZW1	724 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	LINGO4	Q6UY18	593 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SETD3	Q86TU7	594 aa	Predicted RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	TBC1D31	Q96DN5	1066 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	ARHGEF26	Q96DR7	871 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	LOXL4	Q96JB6	756 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	PEBP4	Q96S96	227 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SPON2	Q9BUD6	331 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SEMA4G	Q9NTN9	838 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	ABHD10	Q9NUJ1	306 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	USP36	Q9P275	1121 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	DNAI1	Q9UI46	699 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	VPS51	Q9UID3	782 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	SLC25A13	Q9UJS0	675 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	DMXL1	Q9Y485	3027 aa		13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	ATXN2	Q99700	1313 aa	Known RBP	13.61	□□□□□ -0.23
NUP85-215	ENST00000580879	THADA	Q6YHU6	1953 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	CEP250	Q9BV73	2442 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	EDDM13	A0A1B0GTR0	161 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	MT-CO1	P00395	513 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	RHOQ	P17081	205 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	CD6	P30203	668 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	NNMT	P40261	264 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	SF3A2	Q15428	464 aa	Known RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	CA9	Q16790	459 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	ACCSL	Q4AC99	568 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	ZNF776	Q68DI1	518 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	TCEAL6	Q6IPX3	200 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	SLC36A4	Q6YBV0	504 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	CYP2U1	Q7Z449	544 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	METTL3	Q86U44	580 aa	Known RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	NLRP14	Q86W24	1093 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	STK40	Q8N2I9	435 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	KDM1B	Q8NB78	822 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	PIGK	Q92643	395 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	PTPRN2	Q92932	1015 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	TCEAL3	Q969E4	200 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	TOE1	Q96GM8	510 aa	Known RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	BTBD6	Q96KE9	485 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	PPP1R9B	Q96SB3	815 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	CHP1	Q99653	195 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	NUP85	Q9BW27	656 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	PACSIN1	Q9BY11	444 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	DEF6	Q9H4E7	631 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	MRPL47	Q9HD33	250 aa	Known RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	ITM2C	Q9NQX7	267 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	NENF	Q9UMX5	172 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	SPTBN4	Q9H254	2564 aa		13.6	□□□□□ -0.23
NUP85-215	ENST00000580879	ILVBL	A1L0T0	632 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	BCLAF3	A2AJT9	711 aa	Known RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879		K7ERQ8	282 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	CBX4	O00257	560 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	BNIP3L	O60238	219 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	NDUFS2	O75306	463 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	RNF8	O76064	485 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	DNTT	P04053	509 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	CYP1A2	P05177	515 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	SRC	P12931	536 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	TCF4	P15884	667 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ITPKA	P23677	461 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	EPHB2	P29323	1055 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	MIP	P30301	263 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	L1CAM	P32004	1257 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ACVRL1	P37023	503 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	PSMD8	P48556	350 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	GALC	P54803	685 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	KRT83	P78385	493 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	GNA12	Q03113	381 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	TBX2	Q13207	712 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ARID5B	Q14865	1188 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	DLG2	Q15700	870 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	TSR1	Q2NL82	804 aa	Known RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	LYSMD4	Q5XG99	296 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879		Q6ZVU0	165 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	MMAA	Q8IVH4	418 aa	Known RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	SLC41A1	Q8IVJ1	513 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	DCAF4L2	Q8NA75	395 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ATP11C	Q8NB49	1132 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	GANC	Q8TET4	914 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	FNIP1	Q8TF40	1166 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	FRS2	Q8WU20	508 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	HSPA12B	Q96MM6	686 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	EPAS1	Q99814	870 aa		13.59	□□□□□ -0.23

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