RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 SMR3AQ99954 134 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 TRIM55Q9BYV6 548 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 DCLK3Q9C098 648 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 ASB7Q9H672 318 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 GDAP2Q9NXN4 497 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 VPS54Q9P1Q0 977 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 RCOR3Q9P2K3 495 aaPredicted RBP6.28□□□□□ -1.4
CCDC178-209ENST00000579947 CHORDC1Q9UHD1 332 aaPredicted RBP6.28□□□□□ -1.4
CCDC178-209ENST00000579947 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 COL6A5A8TX70 2615 aa6.28□□□□□ -1.4
CCDC178-209ENST00000579947 ITIH6Q6UXX5 1313 aa6.27□□□□□ -1.4
CCDC178-209ENST00000579947 A6NCN8 305 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 B4E171 279 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 DNAJB5O75953 348 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 PRR29P0C7W0 189 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 HLA-FP30511 346 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 TSPAN7P41732 249 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 STAT5AP42229 794 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 PLA2G4AP47712 749 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 MEOX1P50221 254 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ADKP55263 362 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 RAB15P59190 212 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 CHRNA6Q15825 494 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 KLHDC10Q6PID8 442 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 FAM217AQ8IXS0 508 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 BLIDQ8IZY5 108 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ACBD4Q8NC06 268 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 GGA2Q9UJY4 613 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ADAM21Q9UKJ8 722 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 MRPS18BQ9Y676 258 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 E2F3O00716 465 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 OGTO15294 1046 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 CEACAM4O75871 244 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ATP5C1P36542 298 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 CYP27A1Q02318 531 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 IFRD2Q12894 506 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 TRA2AQ13595 282 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 DCAF12Q5T6F0 453 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 NEK5Q6P3R8 708 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ZNF517Q6ZMY9 492 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 LIMS2Q7Z4I7 341 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 RHOT1Q8IXI2 618 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 UNC5BQ8IZJ1 945 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 CISD2Q8N5K1 135 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 MYCBPAPQ8TBZ2 947 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 PCED1BQ96HM7 432 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 C18orf12Q96KH6 178 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ELOVL4Q9GZR5 314 aa6.27□□□□□ -1.41
CCDC178-209ENST00000579947 ZBTB47Q9UFB7 747 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 CPSF3Q9UKF6 684 aaKnown RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 PNMA8BQ9ULN7 279 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 TMEM184BQ9Y519 407 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 NSD1Q96L73 2696 aaPredicted RBP6.27□□□□□ -1.41
CCDC178-209ENST00000579947 EDDM13A0A1B0GTR0 161 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 CDC14CA4D256 554 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 AGRPO00253 132 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 STC2O76061 302 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 MATR3P43243 847 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 CACNA2D1P54289 1103 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 RINT1Q6NUQ1 792 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 LVRNQ6Q4G3 990 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 LRRC2Q9BYS8 371 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 SLC39A1Q9NY26 324 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 CCDC196A0A1B0GTZ2 297 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 YY2O15391 372 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 GCATO75600 419 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 ASLP04424 464 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 PABPC1P11940 636 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 PSMC1P62191 440 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 EIF2B5Q13144 721 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 ZNF284Q2VY69 593 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 GALNT17Q6IS24 598 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 RPTNQ6XPR3 784 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 PTAR1Q7Z6K3 402 aaPredicted RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 UBE2Q2Q8WVN8 375 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 TTC17Q96AE7 1141 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 MRGPRX3Q96LB0 322 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 TREX2Q9BQ50 279 aaPredicted RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 PLSCR2Q9NRY7 297 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 TMEM30AQ9NV96 361 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 PRRC2AP48634 2157 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 FRMD3A2A2Y4 597 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 CCNT1O60563 726 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 KLKB1P03952 638 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 POLR2EP19388 210 aaKnown RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 HOXD9P28356 352 aaPredicted RBP6.26□□□□□ -1.41
CCDC178-209ENST00000579947 STAT1P42224 750 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 CLDN2P57739 230 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 ST8SIA6P61647 398 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 ZNF235Q14590 738 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 DCAF10Q5QP82 559 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 AGBL4Q5VU57 503 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 TMEM135Q86UB9 458 aa6.26□□□□□ -1.41
CCDC178-209ENST00000579947 FJX1Q86VR8 437 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms