RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 TBC1D3DA0A087WVF3 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3IA0A087WXS9 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3EA0A087X179 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 A0A1B0GVM2 712 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 BICDL2A1A5D9 508 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TCAF2A6NFQ2 919 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 BECN2A8MW95 431 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3LB9A6J9 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 F5H5T6 163 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 SLC7A4O43246 635 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 MED7O43513 233 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 PLRG1O43660 514 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 RTN2O75298 545 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 RFPL3O75679 317 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 LETM1O95202 739 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 GLI1P08151 1106 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3HP0C7X1 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 SLC2A3P11169 496 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 KRT5P13647 590 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 JUPP14923 745 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 NNMTP40261 264 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 ARRB1P49407 418 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 CLDN6P56747 220 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 NUCB2P80303 420 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 PDCLQ13371 301 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TTC39BQ5VTQ0 682 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3CQ6IPX1 549 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 NAPEPLDQ6IQ20 393 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 ENOSF1Q7L5Y1 443 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TRIM69Q86WT6 500 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D3Q8IZP1 549 aaPredicted RBP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 CACTIN-AS1Q8N1I8 211 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 ATP6V0D2Q8N8Y2 350 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 CRELD1Q96HD1 420 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 ASNSD1Q9NWL6 643 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 SLC12A6Q9UHW9 1150 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 CEP83Q9Y592 693 aa10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSNK1D-210ENST00000579308 MCF2LO15068 1137 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 GNA15P30679 374 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 CCR1P32246 355 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 NUDT1P36639 197 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 NUMBP49757 651 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 IRAK1P51617 712 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 OXCT1P55809 520 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 STX17P56962 302 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 TAS2R38P59533 333 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 CDK17Q00537 523 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 CNTN1Q12860 1018 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 OVGP1Q12889 678 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 TARDBPQ13148 414 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 ILKQ13418 452 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 AUHQ13825 339 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 RTP5Q14D33 572 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 DLG2Q15700 870 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 C5orf22Q49AR2 442 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 SLC45A4Q5BKX6 768 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 AGBL4Q5VU57 503 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 FAM46CQ5VWP2 391 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 C14orf80Q86SX3 495 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 PRPF39Q86UA1 669 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 DEFB106AQ8N104 65 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 OXR1Q8N573 874 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 RFFLQ8WZ73 363 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 CPXM1Q96SM3 734 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 SRRTQ9BXP5 876 aaKnown RBP10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 DMTF1Q9Y222 760 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 TBC1D30Q9Y2I9 924 aa10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
CSNK1D-210ENST00000579308 KALRNO60229 2985 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 TRIM38O00635 465 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 ALOX15BO15296 676 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 THAP12O43422 761 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 TLX3O43711 291 aaPredicted RBP10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 CKMT2P17540 419 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 MAT2AP31153 395 aaKnown RBP10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 HNF1BP35680 557 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 EIF2S3P41091 472 aaKnown RBP10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 CENPCQ03188 943 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 EFHC1Q5JVL4 640 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 RABGAP1LQ5R372 815 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 ARTNQ5T4W7 220 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 C6orf118Q5T5N4 469 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 SMYD5Q6GMV2 418 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 TRIM65Q6PJ69 517 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 DSG4Q86SJ6 1040 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 SLC25A45Q8N413 288 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 TMEM145Q8NBT3 493 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 OR8D1Q8WZ84 308 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 NXPE2Q96DL1 559 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 PPP1R13BQ96KQ4 1090 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 PPP1R9BQ96SB3 815 aa10.95□□□□□ -0.66
CSNK1D-210ENST00000579308 NRSN2Q9GZP1 204 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms