RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 EPAS1Q99814 870 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 GPR174Q9BXC1 333 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 NUSAP1Q9BXS6 441 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ADAM33Q9BZ11 813 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 TMEM245Q9H330 911 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 SMOC1Q9H4F8 434 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ANLNQ9NQW6 1124 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 FBXL12Q9NXK8 326 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 DONSONQ9NYP3 566 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 PCSK1NQ9UHG2 260 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 MBD1Q9UIS9 605 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 INTS6Q9UL03 887 aaKnown RBP6.73□□□□□ -1.33
TRAF4-213ENST00000578917 TBC1D30Q9Y2I9 924 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 MIA3Q5JRA6 1907 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 ATG2BQ96BY7 2078 aa6.73□□□□□ -1.33
TRAF4-213ENST00000578917 A0A0D9SEW6 157 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 ILVBLA1L0T0 632 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CCP110O43303 1012 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 AKR1B10O60218 316 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 SIN3BO75182 1162 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 FSBPO95073 299 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 GYPCP04921 128 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RHOQP17081 205 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 ITPKAP23677 461 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 SLC8A1P32418 973 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 EIF4A3P38919 411 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PBX1P40424 430 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PSMD8P48556 350 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 IRAK1P51617 712 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PLK1P53350 603 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 HDAC4P56524 1084 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RPS14P62263 151 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 GNA12Q03113 381 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 GFPT1Q06210 699 aaPredicted RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 SLC20A2Q08357 652 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC15Q0P6D6 951 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CST6Q15828 149 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RAB6CQ53S08 254 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PPP6R3Q5H9R7 873 aaPredicted RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 C9orf64Q5T6V5 341 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 FAM46CQ5VWP2 391 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RNF43Q68DV7 783 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 TCEAL6Q6IPX3 200 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CXorf57Q6NSI4 855 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 ALKBH5Q6P6C2 394 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 LINGO4Q6UY18 593 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RABEPKQ7Z6M1 372 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 DNAAF5Q86Y56 855 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 STK40Q8N2I9 435 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 HDDC3Q8N4P3 179 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC185Q8N715 623 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CEP76Q8TAP6 659 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 OR8D1Q8WZ84 308 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CENPIQ92674 756 aaPredicted RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 TCEAL3Q969E4 200 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 TBC1D31Q96DN5 1066 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 LMLNQ96KR4 655 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 MRGPRX3Q96LB0 322 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CCDC42Q96M95 316 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 HSPA12BQ96MM6 686 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 NCAPGQ9BPX3 1015 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 GTPBP2Q9BX10 602 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 TTYH3Q9C0H2 523 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 BTBD1Q9H0C5 482 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 RAB6CQ9H0N0 254 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 DHX35Q9H5Z1 703 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 CATSPERBQ9H7T0 1116 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 ATP13A1Q9HD20 1204 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PARD6AQ9NPB6 346 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 PPARGC1AQ9UBK2 798 aaKnown RBP6.72□□□□□ -1.33
TRAF4-213ENST00000578917 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 SCML1Q9UN30 329 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 MYO15AQ9UKN7 3530 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 DENND4CQ5VZ89 1909 aa6.72□□□□□ -1.33
TRAF4-213ENST00000578917 OBSL1O75147 1896 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 COL4A2P08572 1712 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 GON4LQ3T8J9 2241 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 IGLV3-10A0A075B6K4 115 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 A0A087X0T9 212 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3KA0A087X1G2 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3FA6NER0 549 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TMEM191CA6NGB0 347 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 LRRC72A6NJI9 287 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 AKR1B15C9JRZ8 316 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 FAM72CH0Y354 149 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 I6L893 689 aaPredicted RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 MYO1FO00160 1098 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.34
TRAF4-213ENST00000578917 BUB1O43683 1085 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 GDF9O60383 454 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SNAP91O60641 907 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 RAMP2O60895 175 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 LRIG2O94898 1065 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 SEMA4FO95754 770 aa6.71□□□□□ -1.34
TRAF4-213ENST00000578917 ADH1BP00325 375 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms