RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 LEKR1Q6ZMV7 388 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 TP53INP2Q8IXH6 220 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 RHOT2Q8IXI1 618 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 RTL3Q8N8U3 475 aaKnown RBP22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 CCDC26Q8TAB7 109 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 PRRX2Q99811 253 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 SPON2Q9BUD6 331 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 KLC2Q9H0B6 622 aa22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 CWC15Q9P013 229 aaKnown RBP22.26■■□□□ 1.15
CDC42EP4-203ENST00000578516 NUMA1Q14980 2115 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 K7ERQ8 282 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 BUB1O43683 1085 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 MOCS3O95396 460 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 MT-CO1P00395 513 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 TNNT1P13805 278 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 NDUFV2P19404 249 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 NOP2P46087 812 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 DGKEP52429 567 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 ECT2LQ008S8 904 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 GNA12Q03113 381 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 SETD3Q86TU7 594 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 NPWQ8N729 165 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 FRMD1Q8N878 549 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 KCNV2Q8TDN2 545 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 CELF6Q96J87 481 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 PCDH18Q9HCL0 1135 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 ETNK2Q9NVF9 386 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 ABCA7Q8IZY2 2146 aa22.25■■□□□ 1.15
CDC42EP4-203ENST00000578516 GOLGA6L6A8MZA4 724 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 DCLK1O15075 740 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 TIMM44O43615 452 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 BUB1BO60566 1050 aaPredicted RBP22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ASLP04424 464 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ATP5BP06576 529 aaKnown RBP22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 AMPD1P23109 780 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 DPYSL2Q16555 572 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ZNF528Q3MIS6 628 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 C6orf118Q5T5N4 469 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ACBD5Q5T8D3 534 aaPredicted RBP22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 SDE2Q6IQ49 451 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 RFX8Q6ZV50 586 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 RASSF3Q86WH2 238 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 RLN3Q8WXF3 142 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 MKRN2Q9H000 416 aaKnown RBP22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 KCNH6Q9H252 994 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ATP13A1Q9HD20 1204 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ZSCAN32Q9NX65 697 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 BCCIPQ9P287 314 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 THADAQ6YHU6 1953 aa22.24■■□□□ 1.15
CDC42EP4-203ENST00000578516 ILVBLA1L0T0 632 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 CBX4O00257 560 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 AXIN1O15169 862 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 SIN3BO75182 1162 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 ERCC2P18074 760 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 MAN1A1P33908 653 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 MAPKAPK2P49137 400 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 ARSEP51690 589 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 CDH6P55285 790 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 GSDMDP57764 484 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 ARF5P84085 180 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 SLC12A1Q13621 1099 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 DPYSQ14117 519 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 LPAL2Q16609 132 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 PGBD3Q8N328 593 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 FAM160A2Q8N612 972 aaPredicted RBP22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 DCAF4L2Q8NA75 395 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 ZBTB44Q8NCP5 570 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 TEKT4Q8WW24 435 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 ARHGEF2Q92974 986 aaKnown RBP22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 HMCESQ96FZ2 354 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 POLMQ9NP87 494 aaPredicted RBP22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 PRSS16Q9NQE7 514 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 PLA2G4CQ9UP65 541 aa22.23■■□□□ 1.15
CDC42EP4-203ENST00000578516 SDK1Q7Z5N4 2213 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 SMAD6O43541 496 aaKnown RBP22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 HRO43593 1189 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 ZMPSTE24O75844 475 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 COMTP21964 271 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 MARCKSL1P49006 195 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 VAV2P52735 878 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 COPAP53621 1224 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 CCZ1BP86790 482 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 CCZ1P86791 482 aaPredicted RBP22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 TCEAL1Q15170 157 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 IL31Q6EBC2 164 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 KIAA1324Q6UXG2 1013 aaKnown RBP22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 POLNQ7Z5Q5 900 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 KIAA1328Q86T90 577 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 WDR5BQ86VZ2 330 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 LONP2Q86WA8 852 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 TSC1Q92574 1164 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 CSPG4P5Q96PW8 444 aa22.22■■□□□ 1.15
CDC42EP4-203ENST00000578516 WASH4PA8MWX3 477 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 H3BRJ5 948 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 RAMP2O60895 175 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 LILRB5O75023 590 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 SRCP12931 536 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 BCKDHBP21953 392 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 OXCT1P55809 520 aa22.21■■□□□ 1.15
CDC42EP4-203ENST00000578516 ST8SIA6P61647 398 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms