RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 AUHQ13825 339 aaKnown RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 CDO1Q16878 200 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 RAB6CQ53S08 254 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 RABGAP1LQ5R372 815 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 TMEM215Q68D42 235 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 FBXL22Q6P050 247 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 MFN1Q8IWA4 741 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ZNF683Q8IZ20 524 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 OR8K1Q8NGG5 319 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 FIBINQ8TAL6 211 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 GPR174Q9BXC1 333 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 MKRN2Q9H000 416 aaKnown RBP13.16□□□□□ -0.3
CCDC57-211ENST00000578187 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ABCB8Q9NUT2 735 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 STIM2Q9P246 746 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 ADAMTS1Q9UHI8 967 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 GGA2Q9UJY4 613 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 NENFQ9UMX5 172 aa13.16□□□□□ -0.3
CCDC57-211ENST00000578187 A0A087X0T9 212 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 A0A1B0GTW7 788 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 H0Y626 953 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CCP110O43303 1012 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 TRIM16O95361 564 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 TPM1P09493 284 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 FAM228BP0C875 321 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 MYBL1P10243 752 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 POLR2EP19388 210 aaKnown RBP13.15□□□□□ -0.3
CCDC57-211ENST00000578187 PRKCHP24723 683 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CD70P32970 193 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 GGCXP38435 758 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 ST8SIA6P61647 398 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 OGDHQ02218 1023 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CDH18Q13634 790 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CHST9Q7L1S5 443 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 ADIPOR2Q86V24 386 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CARNMT1Q8N4J0 409 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 ZNF653Q96CK0 615 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 C1orf74Q96LT6 269 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 RPRD1AQ96P16 312 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-211ENST00000578187 HAPLN3Q96S86 360 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 CNPY3Q9BT09 278 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 MIR1-1HGQ9H1L0 117 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 PCED1AQ9H1Q7 454 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 DNAAF2Q9NVR5 837 aaKnown RBP13.15□□□□□ -0.3
CCDC57-211ENST00000578187 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-211ENST00000578187 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
CCDC57-211ENST00000578187 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 ANKRD62A6NC57 917 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 IGLV3-19P01714 112 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 DNTTP04053 509 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 IRAK1P51617 712 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SIM1P81133 766 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 NRG1Q02297 640 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SCAPQ12770 1279 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 TTC31Q49AM3 519 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 FSCBQ5H9T9 825 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 IL27RAQ6UWB1 636 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 UNQ6494/PRO21346Q6UXR6 183 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 C14orf80Q86SX3 495 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 CIR1Q86X95 450 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SCINQ9Y6U3 715 aa13.14□□□□□ -0.31
CCDC57-211ENST00000578187 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
CCDC57-211ENST00000578187 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
CCDC57-211ENST00000578187 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
CCDC57-211ENST00000578187 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms