RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 PEBP4Q96S96 227 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 KCTD15Q96SI1 283 aaPredicted RBP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 SNRNP25Q9BV90 132 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 OSBPL6Q9BZF3 934 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 TSGA10Q9BZW7 698 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 CATSPERBQ9H7T0 1116 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 ZDHHC4Q9NPG8 344 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 LZTFL1Q9NQ48 299 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 TRMT1Q9NXH9 659 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 DONSONQ9NYP3 566 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 TRIM10Q9UDY6 481 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
PPP4R1-207ENST00000578010 TECTAO75443 2155 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 A0A0D9SEW6 157 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 BTNL10A8MVZ5 291 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 WASH3PC4AMC7 463 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CFAP99D6REC4 459 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 PJA2O43164 708 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SYNCRIPO60506 623 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 PALMO75781 387 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 MTA2O94776 668 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 KLF8O95600 359 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 GOT1P17174 413 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 ERCC2P18074 760 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CXCL12P48061 93 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 NRG1Q02297 640 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SCAPQ12770 1279 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 FZD5Q13467 585 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SLC12A1Q13621 1099 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CCINQ13939 588 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 DMC1Q14565 340 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 POLD3Q15054 466 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 LLGL1Q15334 1064 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 C5orf22Q49AR2 442 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 ACCSLQ4AC99 568 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 FNDC3BQ53EP0 1204 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 PITRM1Q5JRX3 1037 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 Q6ZS52 159 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 TRMT11Q7Z4G4 463 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 RHOT1Q8IXI2 618 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CCDC105Q8IYK2 499 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 ZNF683Q8IZ20 524 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CHPFQ8IZ52 775 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 APCDD1Q8J025 514 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SYCE1Q8N0S2 351 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 PGBD3Q8N328 593 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 RNF10Q8N5U6 811 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 ALLCQ8N6M5 410 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 ZNF513Q8N8E2 541 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 TMEM105Q8N8V8 129 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 TXNDC5Q8NBS9 432 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 OR7D4Q8NG98 312 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 WFDC5Q8TCV5 224 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 WFIKKN2Q8TEU8 576 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 TEKT4Q8WW24 435 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 RAPGEF5Q92565 580 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CLDN23Q96B33 292 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 FEM1AQ9BSK4 669 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CALN1Q9BXU9 219 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 GOLPH3Q9H4A6 298 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 PCDH18Q9HCL0 1135 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 KLHL11Q9NVR0 708 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 POLR3BQ9NW08 1133 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 CWC15Q9P013 229 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SALL4Q9UJQ4 1053 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 VPS28Q9UK41 221 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 AMFRQ9UKV5 643 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 HPCAL4Q9UM19 191 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SLC27A6Q9Y2P4 619 aa6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.87□□□□□ -1.31
PPP4R1-207ENST00000578010 IGLV3-10A0A075B6K4 115 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 ILVBLA1L0T0 632 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 LRRD1A4D1F6 860 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 CBX4O00257 560 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 ZSCAN12O43309 604 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 BNIP3LO60238 219 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 RAMP2O60895 175 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 ZRANB2O95218 330 aaKnown RBP eCLIP6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 KRT1P04264 644 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 ASLP04424 464 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 CD48P09326 243 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 DLDP09622 509 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 KDELR1P24390 212 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 NTSR1P30989 418 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 MAN1A1P33908 653 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 HTR7P34969 479 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 ACVRL1P37023 503 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 CETN2P41208 172 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 MAGEA9P43362 315 aa6.86□□□□□ -1.31
PPP4R1-207ENST00000578010 RPS9P46781 194 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms