RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 F5H5T6 163 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 M0QYV0 167 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
COPS3-214ENST00000577246 KLK10O43240 276 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 RTN2O75298 545 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 USP12O75317 370 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 ZNF18P17022 549 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 DGKAP23743 735 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SYKP43405 635 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
COPS3-214ENST00000577246 KCNC4Q03721 635 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 VAC14Q08AM6 782 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 CNGA2Q16280 664 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 BEND5Q7L4P6 421 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SLC25A45Q8N413 288 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 FAM174AQ8TBP5 190 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SNRNP27Q8WVK2 155 aaKnown RBP13.77□□□□□ -0.21
COPS3-214ENST00000577246 RNF34Q969K3 372 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SLC12A6Q9UHW9 1150 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.21
COPS3-214ENST00000577246 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
COPS3-214ENST00000577246 PIK3R2O00459 728 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 FFAR2O15552 330 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
COPS3-214ENST00000577246 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
COPS3-214ENST00000577246 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 RBMS1P29558 406 aaKnown RBP13.76□□□□□ -0.21
COPS3-214ENST00000577246 AKT2P31751 481 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
COPS3-214ENST00000577246 KCNMA1Q12791 1236 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 DPYDQ12882 1025 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 CBWD6Q4V339 395 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 CBWD3Q5JTY5 395 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 RABGAP1LQ5R372 815 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 CBWD5Q5RIA9 395 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 AGBL4Q5VU57 503 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 IGF2-ASQ6U949 168 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 TMEM270Q6UE05 265 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 FAM181AQ8N9Y4 354 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
COPS3-214ENST00000577246 FAM149B1Q96BN6 582 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 MYEOVQ96EZ4 313 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 TSG101Q99816 390 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 MIS12Q9H081 205 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
COPS3-214ENST00000577246 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 PIAS2O75928 621 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 SLC2A3P11169 496 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 TACR2P21452 398 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 ACADSBP45954 432 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 PLK1P53350 603 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
COPS3-214ENST00000577246 CNTN1Q12860 1018 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 MTA1Q13330 715 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 RAP1GAP2Q684P5 730 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 DCP2Q8IU60 420 aaKnown RBP13.75□□□□□ -0.21
COPS3-214ENST00000577246 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 CLEC4CQ8WTT0 213 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 FRS2Q8WU20 508 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 MED8Q96G25 268 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 PPM1HQ9ULR3 514 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
COPS3-214ENST00000577246 MCF2LO15068 1137 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 ATP9BO43861 1147 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 VAV1P15498 845 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 HNRNPA2B1P22626 353 aaKnown RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS3-214ENST00000577246 CETN1Q12798 172 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 POM121L1PQ3SYA9 428 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 TAC4Q86UU9 113 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 UBR7Q8N806 425 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 TTC9Q92623 222 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 VCPIP1Q96JH7 1222 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 APOLD1Q96LR9 279 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
COPS3-214ENST00000577246 CALN1Q9BXU9 219 aa13.74□□□□□ -0.21
COPS3-214ENST00000577246 DYRK4Q9NR20 520 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms