RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 C2CD4CQ8TF44 421 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 HERPUD2Q9BSE4 406 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 RMI1Q9H9A7 625 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 CHODLQ9H9P2 273 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 Q9N2J8 555 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 FEM1BQ9UK73 627 aa5.8□□□□□ -1.48
NUP88-213ENST00000576862 TMEM272A0A1B0GTI8 110 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 PSG1P11464 419 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 TYK2P29597 1187 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 AARSP49588 968 aaKnown RBP eCLIP5.79□□□□□ -1.48
NUP88-213ENST00000576862 MCM2P49736 904 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 ALKBH1Q13686 389 aaKnown RBP5.79□□□□□ -1.48
NUP88-213ENST00000576862 TTC39AQ5SRH9 613 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 VWA5B1Q5TIE3 1220 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 NUGGCQ68CJ6 796 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 AWAT2Q6E213 333 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 GPSM1Q86YR5 675 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 HERC6Q8IVU3 1022 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
NUP88-213ENST00000576862 VPS52Q8N1B4 723 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 AFG1LQ8WV93 481 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 TRIM31Q9BZY9 425 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 POT1Q9NUX5 634 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 KLQ9UEF7 1012 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 SLC25A13Q9UJS0 675 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 GPR52Q9Y2T5 361 aa5.79□□□□□ -1.48
NUP88-213ENST00000576862 IGLV5-39A0A0G2JS06 123 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 TULP3O75386 442 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ARSAP15289 507 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 CHRNA5P30532 468 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 PNPLA4P41247 253 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 STAT1P42224 750 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ARL4CP56559 192 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 KRTAP10-11P60412 298 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ACTR2P61160 394 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 PMPCAQ10713 525 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ODF3L2Q3SX64 289 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 GXYLT1Q4G148 440 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ENTPD8Q5MY95 495 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 COLCA1Q6ZS62 124 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 KDELC2Q7Z4H8 507 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 LINS1Q8NG48 757 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 ISCA1Q9BUE6 129 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 DECR2Q9NUI1 292 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 THAP1Q9NVV9 213 aa5.78□□□□□ -1.48
NUP88-213ENST00000576862 TRBV5-7A0A0A0MS05 114 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 C17orf100A8MU93 164 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 SEPT4O43236 478 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 TOMM40O96008 361 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 LCKP06239 509 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 ALDH7A1P49419 539 aaKnown RBP5.77□□□□□ -1.49
NUP88-213ENST00000576862 OAZ1P54368 228 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 THOC5Q13769 683 aaKnown RBP5.77□□□□□ -1.49
NUP88-213ENST00000576862 ZNF260Q3ZCT1 412 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 PLK5Q496M5 336 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 MANEAQ5SRI9 462 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 HMBOX1Q6NT76 420 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 RFX8Q6ZV50 586 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 TECPR1Q7Z6L1 1165 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 GLCCI1Q86VQ1 547 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 SLC25A28Q96A46 364 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 ZBTB9Q96C00 473 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 TLR8Q9NR97 1041 aaKnown RBP5.77□□□□□ -1.49
NUP88-213ENST00000576862 DERAQ9Y315 318 aa5.77□□□□□ -1.49
NUP88-213ENST00000576862 STX16-NPEPL1H3BU86 382 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 STX16O14662 325 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 BMP15O95972 392 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 GSTM2P28161 218 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 MVDP53602 400 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 GAD2Q05329 585 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 GALNT7Q86SF2 657 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 PIM3Q86V86 326 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 CCDC25Q86WR0 208 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 TMEM174Q8WUU8 243 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 UBE2Q2Q8WVN8 375 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 ZNF419Q96HQ0 510 aaPredicted RBP5.76□□□□□ -1.49
NUP88-213ENST00000576862 ACAD9Q9H845 621 aa5.76□□□□□ -1.49
NUP88-213ENST00000576862 IRAK2O43187 625 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 FCGR2AP12318 317 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 CYP4B1P13584 511 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 RXRAP19793 462 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 KLRC2P26717 231 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 SLC16A2P36021 539 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 RPS6KA3P51812 740 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 LINC00205P59089 165 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 PKP1Q13835 747 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 ADCK5Q3MIX3 580 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 INO80DQ53TQ3 878 aaPredicted RBP5.75□□□□□ -1.49
NUP88-213ENST00000576862 FAM171A1Q5VUB5 890 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 BRSK2Q8IWQ3 736 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 TMEM57Q8N5G2 664 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 ANKRD42Q8N9B4 389 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 CENPIQ92674 756 aaPredicted RBP5.75□□□□□ -1.49
NUP88-213ENST00000576862 NLRP4Q96MN2 994 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.75□□□□□ -1.49
NUP88-213ENST00000576862 HIPK3Q9H422 1215 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 UPB1Q9UBR1 384 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 DNAJC16Q9Y2G8 782 aa5.75□□□□□ -1.49
NUP88-213ENST00000576862 SYN3O14994 580 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms