RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 I6L893 689 aaPredicted RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 KHNYNO15037 678 aaKnown RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 RNF8O76064 485 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 GYPCP04921 128 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 CFIP05156 583 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 PLEKP08567 350 aaPredicted RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 PSMD8P48556 350 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 PLK1P53350 603 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 ZBTB16Q05516 673 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 MAMLD1Q13495 774 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 RSPO4Q2I0M5 234 aaPredicted RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 C5orf22Q49AR2 442 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 WDR45BQ5MNZ6 344 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 DSG4Q86SJ6 1040 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 DNAAF5Q86Y56 855 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 ATP11CQ8NB49 1132 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 MRGPRX3Q96LB0 322 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 CCDC114Q96M63 670 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 EPAS1Q99814 870 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 GPR174Q9BXC1 333 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 NUSAP1Q9BXS6 441 aaKnown RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 ATP13A1Q9HD20 1204 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 USP36Q9P275 1121 aaKnown RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 ADAMTS1Q9UHI8 967 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 SLCO3A1Q9UIG8 710 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 TBC1D30Q9Y2I9 924 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
SMG6-220ENST00000576218 RALGAPA1Q6GYQ0 2036 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 FRYLO94915 3013 aa15.66■□□□□ 0.1
SMG6-220ENST00000576218 MUC22E2RYF6 1773 aaPredicted RBP15.65■□□□□ 0.1
SMG6-220ENST00000576218 IGLV3-10A0A075B6K4 115 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 DRGXA6NNA5 263 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 CBX4O00257 560 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 CREB3O43889 395 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 ITPKAP23677 461 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 ETFBP38117 255 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 RPS14P62263 151 aaKnown RBP15.65■□□□□ 0.1
SMG6-220ENST00000576218 IL31Q6EBC2 164 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 TCEAL6Q6IPX3 200 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 RABEPKQ7Z6M1 372 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 SYT12Q8IV01 421 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 MMAAQ8IVH4 418 aaKnown RBP15.65■□□□□ 0.1
SMG6-220ENST00000576218 DCAF4L2Q8NA75 395 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 NETO1Q8TDF5 533 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 OR8D1Q8WZ84 308 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 CENPIQ92674 756 aaPredicted RBP15.65■□□□□ 0.1
SMG6-220ENST00000576218 TCEAL3Q969E4 200 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 NTAN1Q96AB6 310 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 OMDQ99983 421 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 BTBD1Q9H0C5 482 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 OSBPL2Q9H1P3 480 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 PPARGC1AQ9UBK2 798 aaKnown RBP15.65■□□□□ 0.1
SMG6-220ENST00000576218 SCML1Q9UN30 329 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 ABCA7Q8IZY2 2146 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 CKAP5Q14008 2032 aa15.65■□□□□ 0.1
SMG6-220ENST00000576218 TCRBV5S1A1TA0A578 114 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 ILVBLA1L0T0 632 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 RNASEH2AO75792 299 aaKnown RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 IL1BP01584 269 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 GNSP15586 552 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 KCNA4P22459 653 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 EPHB2P29323 1055 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 RECQLP46063 649 aaPredicted RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 ATXN3P54252 364 aaPredicted RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 AIF1P55008 147 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 GNA12Q03113 381 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 ELAVL3Q14576 367 aaKnown RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 DLG2Q15700 870 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 TRIM61Q5EBN2 209 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 PLA2G2CQ5R387 149 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 PPP1R15BQ5SWA1 713 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 PLEKHA7Q6IQ23 1121 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 RETSATQ6NUM9 610 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 ZNF783Q6ZMS7 281 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 ZNF683Q8IZ20 524 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 STK40Q8N2I9 435 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 OR52K2Q8NGK3 314 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 MYO19Q96H55 970 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 EDEM2Q9BV94 578 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 TRIM5Q9C035 493 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 MIR1-1HGQ9H1L0 117 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 RSPH9Q9H1X1 276 aaPredicted RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 WSB2Q9NYS7 404 aaPredicted RBP15.64■□□□□ 0.09
SMG6-220ENST00000576218 SUSD2Q9UGT4 822 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 VPS51Q9UID3 782 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 HPCAL4Q9UM19 191 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 CFAP54Q96N23 3096 aa15.64■□□□□ 0.09
SMG6-220ENST00000576218 A0A0D9SEW6 157 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 FAM47DPA6NHR8 397 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 DAPK3O43293 454 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 PRPSAP2O60256 369 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 SNAP91O60641 907 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 LRIG2O94898 1065 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 ADH1BP00325 375 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 RHOQP17081 205 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 TGM1P22735 817 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 MAPKAPK2P49137 400 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 TPI1P60174 286 aa15.63■□□□□ 0.09
SMG6-220ENST00000576218 NRG1Q02297 640 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms