RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 A0A096LPK6 155 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 AP1G2O75843 785 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 PRDX6P30041 224 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CSE1LP55060 971 aaKnown RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 IRF9Q00978 393 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CERCAMQ5T4B2 595 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 EPGNQ6UW88 154 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 NAPRTQ6XQN6 538 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 BHLHA9Q7RTU4 235 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ADGRG6Q86SQ4 1221 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 FAM35AQ86V20 835 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 POU5F2Q8N7G0 328 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 DNAAF3Q8N9W5 541 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 GSTCDQ8NEC7 633 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 URGCPQ8TCY9 931 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 DPF3Q92784 378 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 SENP8Q96LD8 212 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CDH19Q9H159 772 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 S100A14Q9HCY8 104 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 PPM1HQ9ULR3 514 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CDY2AQ9Y6F7 541 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CDY1Q9Y6F8 540 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF638Q14966 1978 aaKnown RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 MYBPHLA2RUH7 354 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 HHLA1C9JL84 531 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 TIMM44O43615 452 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 F7P08709 466 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 NCAM1P13591 858 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 NFKB1P19838 968 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 SP100P23497 879 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF135P52742 658 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 IRF5Q13568 498 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ARL13BQ3SXY8 428 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 HSP90AA5PQ58FG0 334 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 RALGPS1Q5JS13 557 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 OLFML2BQ68BL8 750 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ITPRIPL1Q6GPH6 555 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 TLK2Q86UE8 772 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 KLHDC8BQ8IXV7 354 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF781Q8N8C0 355 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ZSCAN18Q8TBC5 510 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ACTRT2Q8TDY3 377 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 GATA6Q92908 595 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CMTM5Q96DZ9 223 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 MFSD3Q96ES6 412 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ATXN7L3BQ96GX2 97 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 KCNK16Q96T55 309 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-204ENST00000574911 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 TMEM30AQ9NV96 361 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 NDE1Q9NXR1 346 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 RRN3Q9NYV6 651 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 SNX10Q9Y5X0 201 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 SRCAPQ6ZRS2 3230 aa9.13□□□□□ -0.95
NCBP3-204ENST00000574911 BUD23O43709 281 aaKnown RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 H2AFYO75367 372 aaKnown RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 LTFP02788 710 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 C2P06681 752 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF865P0CJ78 1059 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CRABP2P29373 138 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 LHX1P48742 406 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CXCR3P49682 368 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 USP4Q13107 963 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 DLG2Q15700 870 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 FAM110CQ1W6H9 321 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 TWF2Q6IBS0 349 aaKnown RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 TMEM86AQ8N2M4 240 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 ACVR1CQ8NER5 493 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 LENG1Q96BZ8 264 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 PCED1BQ96HM7 432 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 TEKT5Q96M29 485 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 VAT1Q99536 393 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 IL22Q9GZX6 179 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 TSPYL2Q9H2G4 693 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 COG4Q9H9E3 785 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CHRAC1Q9NRG0 131 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 DDIT4Q9NX09 232 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 C17orf102A2RUQ5 167 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 ATP9BO43861 1147 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CACNG3O60359 315 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 HSPA4LO95757 839 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 F9P00740 461 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
NCBP3-204ENST00000574911 ITGAXP20702 1163 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 ABCG1P45844 678 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 NUMBP49757 651 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 PSEN1P49768 467 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 GRIK3Q13003 919 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 MPP3Q13368 585 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 CCNIQ14094 377 aa9.12□□□□□ -0.95
NCBP3-204ENST00000574911 SLC9B1Q4ZJI4 515 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms