RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 STAT1P42224 750 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 CXCR3P49682 368 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 ATXN3P54252 364 aaPredicted RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 SLC25A52Q3SY17 297 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 TTC31Q49AM3 519 aaPredicted RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 RAB6CQ53S08 254 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 ALFQ53S48 1182 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 WDR45BQ5MNZ6 344 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 C9orf64Q5T6V5 341 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 ACBD5Q5T8D3 534 aaPredicted RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPA1-206ENST00000573994 FAM131BQ86XD5 332 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 KDM1BQ8NB78 822 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 DEFB124Q8NES8 71 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 PPP1R9BQ96SB3 815 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 PCDHB18PQ96TA0 734 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 NUP58Q9BVL2 599 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 RAB6CQ9H0N0 254 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 PABPC3Q9H361 631 aaKnown RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 WDCPQ9H6R7 721 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 SEPT11Q9NVA2 429 aaKnown RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 ARHGEF38Q9NXL2 777 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 SUN2Q9UH99 717 aa10.28□□□□□ -0.76
RPA1-206ENST00000573994 TNRC6BQ9UPQ9 1833 aaKnown RBP10.28□□□□□ -0.76
RPA1-206ENST00000573994 ACACBO00763 2458 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 EDDM13A0A1B0GTR0 161 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 A0A1W2PP55 124 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 FAM47DPA6NHR8 397 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 FSBPO95073 299 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 SEMA4FO95754 770 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 CYP1A1P04798 512 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 SRPRAP08240 638 aaKnown RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 GNSP15586 552 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 SCNN1AP37088 669 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 OXCT1P55809 520 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ATP11AP98196 1134 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ZNF252P-AS1Q0IIN9 211 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 GRIK2Q13002 908 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ZNF177Q13360 481 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 CST6Q15828 149 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 CDO1Q16878 200 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 C15orf59Q2T9L4 293 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 BRMS1LQ5PSV4 323 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 N4BP2L1Q5TBK1 243 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 LAYNQ6UX15 382 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 TFAP2DQ7Z6R9 452 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ZNF677Q86XU0 584 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 MMAAQ8IVH4 418 aaKnown RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 STK40Q8N2I9 435 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 MINDY1Q8N5J2 469 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 CADM4Q8NFZ8 388 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 NT5C3BQ969T7 300 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 NAT10Q9H0A0 1025 aaKnown RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 BTBD1Q9H0C5 482 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 MUC3BQ9H195 1237 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 RSPH9Q9H1X1 276 aaPredicted RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 MPP6Q9NZW5 540 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 SUSD2Q9UGT4 822 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 EIF2B4Q9UI10 523 aaKnown RBP10.27□□□□□ -0.77
RPA1-206ENST00000573994 TMEM59LQ9UK28 342 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 VPS28Q9UK41 221 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 PAXBP1Q9Y5B6 917 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 ITIH6Q6UXX5 1313 aa10.27□□□□□ -0.77
RPA1-206ENST00000573994 TPRP12270 2363 aaKnown RBP10.26□□□□□ -0.77
RPA1-206ENST00000573994 NUP205Q92621 2012 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 LRRC10BA6NIK2 292 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 METTL12A8MUP2 240 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 E9PAM4 449 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 TEX33O43247 280 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 BNIP3LO60238 219 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 SNAP91O60641 907 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 OPHN1O60890 802 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
RPA1-206ENST00000573994 CLDN11O75508 207 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 RNASEH2AO75792 299 aaKnown RBP10.26□□□□□ -0.77
RPA1-206ENST00000573994 F9P00740 461 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 RHOCP08134 193 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 MMP8P22894 467 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 NSFP46459 744 aaKnown RBP10.26□□□□□ -0.77
RPA1-206ENST00000573994 METAP1P53582 386 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PRR20EP86478 221 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PRR20CP86479 221 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PRR20DP86480 221 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PRR20BP86481 221 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PRR20AP86496 221 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 ZBTB16Q05516 673 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 SFSWAPQ12872 951 aaKnown RBP10.26□□□□□ -0.77
RPA1-206ENST00000573994 SLC12A1Q13621 1099 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 CLEC16AQ2KHT3 1053 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 POM121L1PQ3SYA9 428 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 ZNF683Q8IZ20 524 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 HDDC3Q8N4P3 179 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 JOSD2Q8TAC2 188 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 RXFP2Q8WXD0 754 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 DNASE2BQ8WZ79 361 aa10.26□□□□□ -0.77
RPA1-206ENST00000573994 PGAP3Q96FM1 320 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms